EST details — SGN-E345009
| Search information |
| Request: 345009 | Match: SGN-E345009 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C143293 | Clone name: cTOF-22-J3 |
| ||
| Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E345009 | Length: 715 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E345009 [] (trimmed)
TTGGAAGAGAAGAAGATGATAATGATGAAGGACCCAGTAACCCCACAAGAAGGCCTGAACCCAAGAGACGTAGAACTACCGCCGGAACTTTCTCT
TGTAGCGTCGTTATCCGTCAACAAGAAGAAGAAGAAGAAAGAGAAAGAGAAAGGGAAAGGGAGAGAGAAAGGGTTGTTGAGGAAGAGGAGGAGGA
GGAGGAGGAGGAAGAGGAGGATTGGGAATCGGAATCGGAATCTGAGGGAAATTTCCGATTGAGCGGTGATCGGAGGTTGCCAGTTCGTGAATCGG
AGGTTGCAAGAGAGAACAGGGCCATTTCTGGGGAGGACCCAGATCAGAATTTGGAGGGTTCAAGAGGAAACGGGTCAATTTCTGTGATGTTATCG
GATCCTGATGTGTTGGATTGCCCAATCTGCCTTGAACATCTCTCTGTTCCTGTCTTTCAGTGTGAGAATGGGCACATAGCATGTGCCTCCTGCTG
CACCAAGATTGCTAATAAGTGTCCATCATGCTGTTGGCCAATTGGATATAACCGTTGTCGAGCTCTGGAGAAGGTTCTAGAATCTGTGAAGGTCT
CATGCGTGAACAAAATGTATGGTTGCAAGGAGATCCTGAGTTATAGTAAGAAAACTGACCATGAAAATGCATGCATCTATGTGCCTTGTTTCTGT
CCTTCCCATGGCTGTGACTTCTTAGGTACCTCAACAAACGTATATGCACA
TGTAGCGTCGTTATCCGTCAACAAGAAGAAGAAGAAGAAAGAGAAAGAGAAAGGGAAAGGGAGAGAGAAAGGGTTGTTGAGGAAGAGGAGGAGGA
GGAGGAGGAGGAAGAGGAGGATTGGGAATCGGAATCGGAATCTGAGGGAAATTTCCGATTGAGCGGTGATCGGAGGTTGCCAGTTCGTGAATCGG
AGGTTGCAAGAGAGAACAGGGCCATTTCTGGGGAGGACCCAGATCAGAATTTGGAGGGTTCAAGAGGAAACGGGTCAATTTCTGTGATGTTATCG
GATCCTGATGTGTTGGATTGCCCAATCTGCCTTGAACATCTCTCTGTTCCTGTCTTTCAGTGTGAGAATGGGCACATAGCATGTGCCTCCTGCTG
CACCAAGATTGCTAATAAGTGTCCATCATGCTGTTGGCCAATTGGATATAACCGTTGTCGAGCTCTGGAGAAGGTTCTAGAATCTGTGAAGGTCT
CATGCGTGAACAAAATGTATGGTTGCAAGGAGATCCTGAGTTATAGTAAGAAAACTGACCATGAAAATGCATGCATCTATGTGCCTTGTTTCTGT
CCTTCCCATGGCTGTGACTTCTTAGGTACCTCAACAAACGTATATGCACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E345009] | SGN-U564461 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T158290 [Download][View] | Facility Assigned ID: TOFDI50TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
