EST details — SGN-E355640
| Search information |
| Request: 355640 | Match: SGN-E355640 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C101551 | Clone name: cLHT-1-L1 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193672 [TUS-68-N6] | Trace: SGN-T346668 | EST: SGN-E545793 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193672 [TUS-68-N6] | Trace: SGN-T346669 | EST: SGN-E545794 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E355640 | Length: 499 bp (933 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E355640 [] (trimmed)
TTTGGGTAGTCAAGGAATCCACATGCTGTGCCAAATAAAGGATGGTTCCTGCCATTCTCGAGCAATCTTATTCAAAGTTCTTGCTGATACTGTGG
GCCTTGAGTGCAAGCTGATTGTGGGTTTCCCAAGAGGAGGAGCACTGGAGTGTGCAGATTCATCTAAGCACATCTATGTCACAGTCATTCTGGAT
TCTATAGAACTACTGGTTGACCTTATGCATTGTCCTGGCAAGCTGTTTCCTTGTTCAACGAAGCAGCTACATCGCTCACATTTCTTTGGTGAGAG
TGATTCTGTAGAAACTGATTCATGTAACTCACCGATGGGTCCCATTAGTCCTACCTGTTTCAGTTCCGACTACAGTGGCACTGGAAGTCCAGAGC
ATCCTTTCTTGAGGGGACCTGNGAGGTCTATTCTTGGTGGTCGTGCACAGTCTTTCAAGGACTGCAACTATGACGTTACTTCTTCAAGGTCTGCT
GGTGCATCACCTATACACACTCGT
GCCTTGAGTGCAAGCTGATTGTGGGTTTCCCAAGAGGAGGAGCACTGGAGTGTGCAGATTCATCTAAGCACATCTATGTCACAGTCATTCTGGAT
TCTATAGAACTACTGGTTGACCTTATGCATTGTCCTGGCAAGCTGTTTCCTTGTTCAACGAAGCAGCTACATCGCTCACATTTCTTTGGTGAGAG
TGATTCTGTAGAAACTGATTCATGTAACTCACCGATGGGTCCCATTAGTCCTACCTGTTTCAGTTCCGACTACAGTGGCACTGGAAGTCCAGAGC
ATCCTTTCTTGAGGGGACCTGNGAGGTCTATTCTTGGTGGTCGTGCACAGTCTTTCAAGGACTGCAACTATGACGTTACTTCTTCAAGGTCTGCT
GGTGCATCACCTATACACACTCGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E355640] | SGN-U604436 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T169755 [Download][View] | Facility Assigned ID: THTAC61TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.988 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 14.5 |
Working
