EST details — SGN-E355950
| Search information |
| Request: 355950 | Match: SGN-E355950 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C101758 | Clone name: cLHT-21-N5 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193892 [TUS-69-G10] | Trace: SGN-T347046 | EST: SGN-E546171 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193892 [TUS-69-G10] | Trace: SGN-T347047 | EST: SGN-E546172 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E355950 | Length: 282 bp (807 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E355950 [] (trimmed)
TTTGGCAGCATTGGAAGCTGTGTGTAGCAGCTCTTCACCAAAGTCCAAATAACAAATCAAAACACATCAAGCAAACAGACTGTTAACCAGAGGGC
CAGGAGGAGAAGAGGTAGAACACCTACTCCAGGAAAATATTTGGGGCTTAGAACTGTTCGCGTTCGTCGTGAATCACGAAACTATCCTCATCATT
CAAGGAATCGCTCTCATTGTTACTCATCTGAAAGCTACAGGAGCATGAGCTGGTCTTACTCTGCATATTACCGGCAAGAGCATATATCATAC
CAGGAGGAGAAGAGGTAGAACACCTACTCCAGGAAAATATTTGGGGCTTAGAACTGTTCGCGTTCGTCGTGAATCACGAAACTATCCTCATCATT
CAAGGAATCGCTCTCATTGTTACTCATCTGAAAGCTACAGGAGCATGAGCTGGTCTTACTCTGCATATTACCGGCAAGAGCATATATCATAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E355950] | SGN-U574358 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T170136 [Download][View] | Facility Assigned ID: THTDE75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0188 | Quality Trim Threshold: 14.5 |
Working
