EST details — SGN-E358217
Search information |
Request: 358217 | Match: SGN-E358217 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C102031 | Clone name: cLHT-23-D2 |
| ||
Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193967 [TUS-69-J13] | Trace: SGN-T347175 | EST: SGN-E546300 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193967 [TUS-69-J13] | Trace: SGN-T347176 | EST: SGN-E546301 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E358217 | Length: 369 bp (901 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E358217 [] (trimmed)
CAGCATTGTTCAGCAAGTTGGGTGTTCCCATCAAAACGACTGTGTCTGCTAATGTTCTTGAAGAAGCTTTGAATGGAACTGTCACAATCCGCCCT
CTTCCAATCGGGACGTCTCTTAGTGGAAAGGTTGAAAAGCAAAGTGCCCATTTTTTCGGTGTAACGATTAGCAACGAACAAGCGGAGGCAGGGCT
TGTAGTTAGAGTTACTTCAGCAGCTCAAAGCAAGTTTAAGCTACTGTATTTTGAACAAGATGCAAATGGAGGTTATGGACTGGCTTTGCAGGAAG
ATAGTGAGAAAACAGGTAAAGTAACTTCAGCAGGAATGTATTTCCTGCACTTTCAGGTGTACAGAATGGATTCAACTGTAAATG
CTTCCAATCGGGACGTCTCTTAGTGGAAAGGTTGAAAAGCAAAGTGCCCATTTTTTCGGTGTAACGATTAGCAACGAACAAGCGGAGGCAGGGCT
TGTAGTTAGAGTTACTTCAGCAGCTCAAAGCAAGTTTAAGCTACTGTATTTTGAACAAGATGCAAATGGAGGTTATGGACTGGCTTTGCAGGAAG
ATAGTGAGAAAACAGGTAAAGTAACTTCAGCAGGAATGTATTTCCTGCACTTTCAGGTGTACAGAATGGATTCAACTGTAAATG
Unigenes |
Current Unigene builds | |||||
[SGN-E358217] | SGN-U574491 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170777 [Download][View] | Facility Assigned ID: THTDN13TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |