EST details — SGN-E359097
Search information |
Request: 359097 | Match: SGN-E359097 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C100860 | Clone name: cLHT-11-B22 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193731 [TUS-68-P17] | Trace: SGN-T346770 | EST: SGN-E545895 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E359097 | Length: 542 bp (905 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E359097 [] (trimmed)
TATGTAGAAGCTCGACCCGGAGAAGAGGTTCCACCTGAAGATGGACTTAGTTGGAGAAAATATGGACAGAAACTTGTCTTAGGTTCAAAATATCC
CAGAGAATATTATCGATGTGCTCGTCGTTGTTGTGGGGCTACTAAGATGGTCCAACGAATCGAGACAGGACCATTAACTTTTGAAATTACCTATG
GAGGAAGTCACAGTTGTGGTCAAGAAACCAAAAATCAAAATGAAGAACTACTTGCTGTGCAGCAGACAAAATGTGATGAAGTTGAAAGAGGAGCC
CGGGAAATATTTGAATCCTATATTCATAAGATGGTTTCAACCCCAAATAATTCATATAACAATTCCTCAACAGGGGATGTGTTCTCAAACTCCAA
TTCTTTGTTCAACATCCCCAATTCCGACTTCATCCCCACACCGACTTCTTTACCTCATCCAGACACAGACTTTCTACTTGACGATGATAGTCTCA
CTCTCTTGTTTGATCATGATGTGCCTGAAAATTCTGGCAATGATTCTCTGGCTGCTCTGGCTGGTGA
CAGAGAATATTATCGATGTGCTCGTCGTTGTTGTGGGGCTACTAAGATGGTCCAACGAATCGAGACAGGACCATTAACTTTTGAAATTACCTATG
GAGGAAGTCACAGTTGTGGTCAAGAAACCAAAAATCAAAATGAAGAACTACTTGCTGTGCAGCAGACAAAATGTGATGAAGTTGAAAGAGGAGCC
CGGGAAATATTTGAATCCTATATTCATAAGATGGTTTCAACCCCAAATAATTCATATAACAATTCCTCAACAGGGGATGTGTTCTCAAACTCCAA
TTCTTTGTTCAACATCCCCAATTCCGACTTCATCCCCACACCGACTTCTTTACCTCATCCAGACACAGACTTTCTACTTGACGATGATAGTCTCA
CTCTCTTGTTTGATCATGATGTGCCTGAAAATTCTGGCAATGATTCTCTGGCTGCTCTGGCTGGTGA
Unigenes |
Current Unigene builds | |||||
[SGN-E359097] | SGN-U586854 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T171299 [Download][View] | Facility Assigned ID: THTBR11TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |