EST details — SGN-E359856
| Search information |
| Request: 359856 | Match: SGN-E359856 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C108660 | Clone name: cLPP-9-M20 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194527 [TUS-71-A21] | Trace: SGN-T348137 | EST: SGN-E547262 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E359856 | Length: 727 bp (911 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E359856 [] (trimmed)
AAGCTTCAAAGGGGGAAAGAACACAACATGAGGGCCATATTTTGTGGCAATCTGGAGTTTGACGCTCGCCAGTCAGATGTTGAGCGGCTTTTCAG
AAGATATGGGAAGGTTGATAGGGTGGACATGAAATCTGGCAGGATACTTGGAAATTCCTAGATCTTCCTGGATGAAGGGTTCTCTGCCTTTCTTT
TTTTGGCTTGTGCCCAAGATACATACTCTTATGTTTATCTAAAAGAACCAATATGATCTGCCATGGTTCTACCATCGTACAATTTACTGAGACCA
TTGCCTTTGCATTCCTCATGACCTTTGCTCAGTCCTCGATATCCGACATGTTTCAACATAGATAGCATGACCATCTCGGATCCAGTGGCAGCTGT
TGAGTTCCTTCATACAGATTTTTCTTTCCCCTTCCCCCCTTCCCCCCTCATTCGTGGGGGGTTTTGGGTGGGATTTGCTTTCATTTATATGGAGG
ACGAGCGAGATGCTGATGATGCAATTAGAAGGCTTGACAGGATAGAGTTTGGTAAAAAGGGACGCCAGCTTTCGTGTAGAATGGACTAAGGATNC
GTGGGTAGTAGGAGGCCCTGAAATTTCCAGAAAACCTGCTGCAAATACTAGACCTTCAAAGACTTTATTTGTCATCAAACTTTGATCCAGTTCAT
ACTCAGACAAGGGCATAGNAGAAGTATTTTGAACCATATGGTAGATATNCAAATGTTTCGAA
AAGATATGGGAAGGTTGATAGGGTGGACATGAAATCTGGCAGGATACTTGGAAATTCCTAGATCTTCCTGGATGAAGGGTTCTCTGCCTTTCTTT
TTTTGGCTTGTGCCCAAGATACATACTCTTATGTTTATCTAAAAGAACCAATATGATCTGCCATGGTTCTACCATCGTACAATTTACTGAGACCA
TTGCCTTTGCATTCCTCATGACCTTTGCTCAGTCCTCGATATCCGACATGTTTCAACATAGATAGCATGACCATCTCGGATCCAGTGGCAGCTGT
TGAGTTCCTTCATACAGATTTTTCTTTCCCCTTCCCCCCTTCCCCCCTCATTCGTGGGGGGTTTTGGGTGGGATTTGCTTTCATTTATATGGAGG
ACGAGCGAGATGCTGATGATGCAATTAGAAGGCTTGACAGGATAGAGTTTGGTAAAAAGGGACGCCAGCTTTCGTGTAGAATGGACTAAGGATNC
GTGGGTAGTAGGAGGCCCTGAAATTTCCAGAAAACCTGCTGCAAATACTAGACCTTCAAAGACTTTATTTGTCATCAAACTTTGATCCAGTTCAT
ACTCAGACAAGGGCATAGNAGAAGTATTTTGAACCATATGGTAGATATNCAAATGTTTCGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E359856] | SGN-U565746 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T172519 [Download][View] | Facility Assigned ID: TPOBH82TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0184 | Quality Trim Threshold: 14.5 |
Working
