EST details — SGN-E360396
| Search information |
| Request: 360396 | Match: SGN-E360396 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C108293 | Clone name: cLPP-8-H6 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194473 [TUS-70-O15] | Trace: SGN-T348044 | EST: SGN-E547169 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194473 [TUS-70-O15] | Trace: SGN-T348045 | EST: SGN-E547170 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E360396 | Length: 268 bp (966 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E360396 [] (trimmed)
GCAATTTCAAAGGGTGCGGCAATCAAAAGGAAACCAGGAGCTGAATAATGAGTTGAAAATAAAAGCAAATGAACTTGAAAAGCTCTTCGCTGAGC
ATCAATTGCGTACTCCTCCTGCAGCTGGAAATTATCAATCTAATTATTTTACCAGCAGCAAAATTAGTAGGCACGGTCACATGCAAAGCTGGCCA
TCTGACAATGCCTGCGGCGACTTTCTCGATGATCAAGTATTTGATAATGATAGTATGAATATAGATAAAAACTCTTAT
ATCAATTGCGTACTCCTCCTGCAGCTGGAAATTATCAATCTAATTATTTTACCAGCAGCAAAATTAGTAGGCACGGTCACATGCAAAGCTGGCCA
TCTGACAATGCCTGCGGCGACTTTCTCGATGATCAAGTATTTGATAATGATAGTATGAATATAGATAAAAACTCTTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E360396] | SGN-U564250 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T172272 [Download][View] | Facility Assigned ID: TPOBF39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 20.5 |
Working
