EST details — SGN-E362541
| Search information |
| Request: 362541 | Match: SGN-E362541 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C106127 | Clone name: cLPP-1-O7 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194260 [TUS-70-F18] | Trace: SGN-T347678 | EST: SGN-E546803 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E362541 | Length: 334 bp (1041 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362541 [] (trimmed)
GATCTCAATTCTTGATGATCCTAGTATTAGTAGAGTCATGAGGGAAGCTGGTTTTTCTAGTACACAAGTGAAAAACAATGTAGAACAAGTTGTTT
CTAGTATGGAGATAATTACTAGCACAAAGCCATTAGTACTAGGAAACACAAACACCAATACCAACACACAAATAACATCATCAACTAGTCATCAT
CATCATGTTCTAAATTTGTCACTTAGTAAAACAGGACAACATCAAGTTGTAAAGAATGATGATGTTATGAGTGTTGTGGAAAGTATGATGAATTT
CAAGAAAAGGAGAAACATTGTTGTTATTGGTGAGTGTTTAGCCACAAGT
CTAGTATGGAGATAATTACTAGCACAAAGCCATTAGTACTAGGAAACACAAACACCAATACCAACACACAAATAACATCATCAACTAGTCATCAT
CATCATGTTCTAAATTTGTCACTTAGTAAAACAGGACAACATCAAGTTGTAAAGAATGATGATGTTATGAGTGTTGTGGAAAGTATGATGAATTT
CAAGAAAAGGAGAAACATTGTTGTTATTGGTGAGTGTTTAGCCACAAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362541] | SGN-U601418 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T174602 [Download][View] | Facility Assigned ID: TPOAA88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.917 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 20.5 |
Working
