EST details — SGN-E363331
| Search information |
| Request: 363331 | Match: SGN-E363331 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C107234 | Clone name: cLPP-4-L17 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194337 [TUS-70-I23] | Trace: SGN-T347811 | EST: SGN-E546936 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194337 [TUS-70-I23] | Trace: SGN-T350328 | EST: SGN-E549453 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E363331 | Length: 505 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E363331 [] (trimmed)
GAGAAAGCAATTATTTTTATCCGAGCTAAGAGAAAAAAGGGCTGAGTCAAAAAGGCAAACACTCCTTCATCAATCAAATACTACTTGCGCTCTTA
GAATTATTAGTTCTTCATTATCTCCTCAGGAAGTTGAAGCTTCTGAAGCCACAAACCTACCAGTTACTTTAACTACAGGACAGCATCAATCAAAT
AGTACTGGCGCCCTTACAATCAACACTTCTTCGTTATCTCCTCAAGAAGTTGAAGCTTTCGAAGTTACAAACCTACCAGTTAATTCAACTACAGG
AGAACATCAATTAAATAGTACTGGCGCCCTTACAATCAGCACTTCTTCGTTATCTCCTCGAGAAGTTGAAGCTTCTAAAGCTATAAACCTACCAG
TTACTTCAACTAAAGGAGAAAGTATAGTTAATTGCTTATCTACCTTTGAAGTAAGATCAACGTCGGGTGCATCTCATGCTGCAAGCAGATCAAGT
TCAAGACGTACTTCAAATAGAGCAACAACT
GAATTATTAGTTCTTCATTATCTCCTCAGGAAGTTGAAGCTTCTGAAGCCACAAACCTACCAGTTACTTTAACTACAGGACAGCATCAATCAAAT
AGTACTGGCGCCCTTACAATCAACACTTCTTCGTTATCTCCTCAAGAAGTTGAAGCTTTCGAAGTTACAAACCTACCAGTTAATTCAACTACAGG
AGAACATCAATTAAATAGTACTGGCGCCCTTACAATCAGCACTTCTTCGTTATCTCCTCGAGAAGTTGAAGCTTCTAAAGCTATAAACCTACCAG
TTACTTCAACTAAAGGAGAAAGTATAGTTAATTGCTTATCTACCTTTGAAGTAAGATCAACGTCGGGTGCATCTCATGCTGCAAGCAGATCAAGT
TCAAGACGTACTTCAAATAGAGCAACAACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E363331] | SGN-U581195 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T175768 [Download][View] | Facility Assigned ID: TPOAO69TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
