Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E367270

Search information 
Request: 367270Match: SGN-E367270
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C110552Clone name: cLPT-5-H13
cartOrder Clone
Library Name: cLPTOrganism: Solanum pennellii (formerly Lycopersicon pennellii)

Tissue: leaf trichomes
Development Stage: 4-8 weeks old

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367270Length: 558 bp (999 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E367270 [] (trimmed) GAGTGCTTTCTGGAAATATTTGGGAGAACCTTTCTTCGTGGATGCCACAGAGAGAGAGCTCTCTCTCTGCTCAGCCGGTGACAGATGATAGCAGG
TTTCCTGGGAGAGGAAGAACTCTGAGTTCCCAGACCACCACGACTAATCATGATTCAACGTTACAGGCTAGGCTCCTGGATGGTAGCAGCAGCCC
TGAGCGTAGTTCACCTACTGCTACAATAGGTGGAGAGCGGAGCTTAGCTGGAAGGTGCTAGAAACAGACTGTTATTACATGCTAAATTGTTAATA
CTCATATATCTGTTTTGTATTTGACTAAATCATTGGTTGGTGCACTAAGATGGATCCGTTTTAGTTATATTTTCATGTGCTGCTGAAACTGCTCT
CCAGTTGAACGGTTTGCTGTAAAACGAGGTGTTTAAATTGGTTGATCCAGTAACCAAGTTTAAGTTATATCGCTATAGAAAGGAAAAGCTGGATT
TTCTTCAATCCGTTCACAAAATACAATTCCTATGATTCTTTTTTTTCTCTGGATAGGTTCTTCTGGATTTTCTGATTTCTATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367270] SGN-U594967 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T178539 [Download][View] Facility Assigned ID: TPTAS43TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0072 Quality Trim Threshold: 14.5