EST details — SGN-E367971

Search information 
Request: 367971Match: SGN-E367971
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176005Clone name: TUS-22-N3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176005 is on microarray TOM1 spot ID 1-1-6.2.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18666 [cLED-24-D24] Trace: SGN-T54900 EST: SGN-E241003 Direction: 5' Facility: TIGR
Clone: SGN-C176005 [TUS-22-N3] Trace: SGN-T180721 EST: SGN-E367972 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367971Length: 663 bp (895 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367971 [] (trimmed) AACTTCAGAAGACAATAATGTATGATTTGTCTTTTTTGTATCATACAACAAAAAAGTTCTTTACAAAAGATCTAATCACAAAACATTCAAGTCAT
TTTTTGAAATGTTATATAACGATGTAGAAACAATATTTGTTTGGTCAGTCAATATTTTGTACTTATTGCTTTCTCCATAAACATTTCTGTAGGTT
CAAGGCATCCCCTTACTGCATCATGTCCAAGTTGGGCTCTTTCGTTGTCTCCAAATCCAAAGACTCGTCCACAATTTGTAACAACTACTGTGTGG
TATAAGCCAGTGCTGATTTGAGATATGTGATGGGATCTCAAGCTCTCCAGGATACGAGGCTTCAAAACTTTATCTGATGCTCCTCTGTCAAGGAA
TCCGAGGCTACCAAAACCCATCCAGCCAAAGCCATAAACAGAACCATCGTCCACAAGGACAAACGTTTTCCTCTTGCTTGCACAAACCTGAACTG
CTAGATGGCTCTTAAGGCTGGTCAAGTGTGACGGAGTAGTCTTATCAGTCTCATCACCATGCCCCAATGCACCGCAATAACCTTTCCCCCAAGTA
TATACATATCCAGTGGAATCCAGTGCCACAACATGCTCATCTCCAGCAGAAACACGAGCCACATTATTGCCCTTCCTCTTAAACGACTGGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367971] SGN-U572215 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180720 [Download][View] Facility Assigned ID: FA0AAD10CG02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5