EST details — SGN-E368446

Search information 
Request: 368446Match: SGN-E368446
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176301Clone name: TUS-23-J11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176301 is on microarray TOM1 spot ID 1-1-6.2.10.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26401 [cLEF-40-E19] Trace: SGN-T59934 EST: SGN-E246082 Direction: 5' Facility: TIGR
Clone: SGN-C176301 [TUS-23-J11] Trace: SGN-T181372 EST: SGN-E368445 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E368446Length: 648 bp (946 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368446 [] (trimmed) GTCAGCGCTCTCATTCATCTATTTGGTTAAGTCATGAGTAGGTTATATATTTTGAGTAATTCCTCCATTGCATTTTTTAGTGGATTGTACACTAT
GGCTTGTAAAGGTTCTCTGATTTGCTATACACAATTTTACTTCAATATTTTGATGAGTTTTGTCTGGCATAGTAGCTCGACTCCGTTTCTTATAG
GACCATTCCTTGACTAAGAGTTATACGTGAATGGCGAAAAGATTAATAAAGAAATGACGATTTTCAAAGAACGTGATCAAGTTATATAGGTTCAG
GCCTTTGAAATGCACAGACACTGTTACTTGTTAAGATCAGCATGATTAGTGGTTGGAATTTGCAAAATGGTTGTCATTCCAGTCCTTGGTCAACT
AGCTGATGAGTACGGGCGTAAACCTCTACTTCTTTTAATCGTATCTACTGCTATTTTTCCCAGTGCTATATTGGCTATAGACGAGTCGAAAGGAT
TTGTCTATGCTTATTATGTGCTGCGGATGATTTCTCATATCATGAGTCAAGGAAGTATTTTCTGCATTTCTGCAGCTTATGCAGCAGATATTCTT
GATGGTAGAAGCAGGGCTGCAGCTTTCGGTTGGATGCATGGAATTTTATCTTTATCGCATGTTTTGGGAAACTTTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368446] SGN-U564268 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181373 [Download][View] Facility Assigned ID: FA0AAD11CE06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5