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EST details — SGN-E370780

Search information 
Request: 370780Match: SGN-E370780
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178176Clone name: TUS-28-H14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178176 is on microarray TOM1 spot ID 1-1-3.4.4.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64676 [cLEM-6-N19] Trace: SGN-T84486 EST: SGN-E270730 Direction: 5' Facility: TIGR
Clone: SGN-C178176 [TUS-28-H14] Trace: SGN-T183713 EST: SGN-E370781 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370780Length: 760 bp (891 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370780 [] (trimmed) GAACAATGGTATAATTTTATTTCTATAAACAACAGAGGAGCAGCCATAATCAGTATATGATATTTGTCCACCTCTGGTGGCGAACAATCATATAC
CATAACAATTATCAATAGATATATTTTAACATGTACAAAGAACACAGCTTTGTTATAAACACTAATGGTGCATATTAATGAAATTTAACAAGAAA
GCACAAAAAACAAAGTTATTTATTATGTATACAAACAAATTCAAGTGCCCAAACACAACAACCTACTCCAAAGTTAATGTCTTTACGATTCCTCG
TCAATATATCATGCAACAAATTCGAATAAAATCACAAGGATTCAGCCTTTCTCACCATCATGGCGTCAAGGGACCGCCTTCTAAGTTCTCCATCT
GCACGCTGCTTTTCAGAGGCACATATTCCCCAAGGTATCCACCAAGATGATCGTAGAGAGCAGTCTTATCTATCTCTTGATGATGGTAGCTCTTG
CAAACATAGTAAAACACACTTTGCATCAAAAGCCCCACAAGATTCACAATCACCAATACTCCAACCAAGAACCCACCAATCAAAATCCTTGAAAT
CACACCATAATTATCACCTCCATGAACCACAACAGACCCAAAAAACCCATTAATTACCCCACAAATAGACAAATATCCAAAAACAAAGAAAAATG
CCATTCCTGTCTTCCCTTTCAACAACTGATAGCTCTTCTTCATAGCTCCTATACCATAAATAGGCTCAAGAACAGACACCACACTGGCCAAATGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370780] SGN-U570398 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183712 [Download][View] Facility Assigned ID: FA0AAD16DD07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.935 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5