EST details — SGN-E373302

Search information 
Request: 373302Match: SGN-E373302
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179173Clone name: TUS-31-B3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179173 is on microarray TOM1 spot ID 1-1-6.2.2.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76577 [cLES-18-H17] Trace: SGN-T101739 EST: SGN-E289297 Direction: 5' Facility: TIGR
Clone: SGN-C179173 [TUS-31-B3] Trace: SGN-T185441 EST: SGN-E373303 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E373302Length: 666 bp (899 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E373302 [] (trimmed) GGACACAGTTATGTTCTCTGGAATATTAAAATATTATGATCAATTCTCTACAAAAGTATATGTCCAAAATAAGCTCTAAATCCCTTGGGCGATTT
AATTTCCACTTACAATAAGCCAACTTCCTACTACAGCAGCACAAAGACATACGGTTTTATTTTAAATTAAAAAAATTAGAGCTATTATGTACACG
AAATTGGGAATGGAGGAGGGGGAATCAAGCAGGCGAAAATGGACCCATTCTGCAAGCGCAACATGTGATTTTCATATGAAATTTAGTTGATGAAT
CCTTGTAGGCTTAGGCGCGAAACCGGTCACAATCATTGGCACCATTCTTAGTGAAAAGGGATATAAGACCATTCTTCATTCTGGATACTGATTCT
TTGAATGTTACTGAGCTCTTCTCTGCAGTTGCACTAAAATCCTGGACTATTCCGTTGACCACTGAACCAACTGGAGCTCCTTCTATATATGCCTT
GCATGCAGAGAGAATGTCTACAGCATGGCAACGGAAATGACCTTTGACAAGGTCTTCAAAATGCTTTGGTGGCCTCCTCAACGTATATGTCATTG
TTTTCAAAGATAGAACAAAAACATCTTCATTGTAAGAGTTAGATCTCCTCTGTCCCTCAGGTCCAGCATATGAAGCTTCATATCCAGGCTCATTA
A
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373302] SGN-U565926 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185440 [Download][View] Facility Assigned ID: FA0AAD19CA02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0116 Quality Trim Threshold: 14.5