EST details — SGN-E373666
Search information |
Request: 373666 | Match: SGN-E373666 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C179972 | Clone name: TUS-33-C10 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C87066 [cLET-45-D15] | Trace: SGN-T111623 | EST: SGN-E300451 | Direction: 5' | Facility: TIGR |
Clone: SGN-C179972 [TUS-33-C10] | Trace: SGN-T186632 | EST: SGN-E373667 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E373666 | Length: 772 bp (948 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E373666 [] (trimmed)
GATGTAAATCAGATAGAAATCTATAAATAATTACTCCTCACAAGTGTCAAAATTTACTTACAGAATATACACTTAAAACTTAAACTATGTATCTG
TATCCCCCCTCTATACCACCAAAAACCTTTTTTAAGTCTAGTTTGGTTATTGAGAAACAAAACTTACATGTGTAAAAGGTACCGGAAACTAAATT
CATAAGGCACTATCTGAAGAACGTTGGAGAGAGGCTCGTTGTTCTTTCTCTCGAGACAGTTGATTGCTTCTTTTCCGTGTTCATTTGGAAGTTGA
AGACATATCCAATCAAGTAGTGACTCTAGATCCTTTGCAAAATCTAGCAGATACCAGTCCAACAGCTTTGGTATTGCTACCAACTTCTTTGATGT
TGAAACGCCAACAGATGCCTGCAAATACTCCTTCTTTGCTACTTGAAGCTCATTTTCAATATTTGCTGCTGTGTATACTCTCACAGCAGGAGAGG
AAAAACTTCCACAAGAGAGAGCAAATGTCACCAATGGTTCGGAAAGCTCCAAGCCAAAAATGCTGCGTGCAGTCATCTCGTCATTCTTTACACCC
TTAGCAAAAGTAAATTTTGAGTGATAAGGCAACCTCAAAATGAAATGCTCAATGGTTATGGCATTAAGCAAGTGTCCACTAACATTTATTGTTGC
CTTTTGCATCAATGCCACAACCATTTCAGGGTTCTCAGGTAGGCCATACTCCAGGAAGGCATTCATCATGCATGAATTGTAAATGTTGATCCAGA
AAGCCAGCTTTT
TATCCCCCCTCTATACCACCAAAAACCTTTTTTAAGTCTAGTTTGGTTATTGAGAAACAAAACTTACATGTGTAAAAGGTACCGGAAACTAAATT
CATAAGGCACTATCTGAAGAACGTTGGAGAGAGGCTCGTTGTTCTTTCTCTCGAGACAGTTGATTGCTTCTTTTCCGTGTTCATTTGGAAGTTGA
AGACATATCCAATCAAGTAGTGACTCTAGATCCTTTGCAAAATCTAGCAGATACCAGTCCAACAGCTTTGGTATTGCTACCAACTTCTTTGATGT
TGAAACGCCAACAGATGCCTGCAAATACTCCTTCTTTGCTACTTGAAGCTCATTTTCAATATTTGCTGCTGTGTATACTCTCACAGCAGGAGAGG
AAAAACTTCCACAAGAGAGAGCAAATGTCACCAATGGTTCGGAAAGCTCCAAGCCAAAAATGCTGCGTGCAGTCATCTCGTCATTCTTTACACCC
TTAGCAAAAGTAAATTTTGAGTGATAAGGCAACCTCAAAATGAAATGCTCAATGGTTATGGCATTAAGCAAGTGTCCACTAACATTTATTGTTGC
CTTTTGCATCAATGCCACAACCATTTCAGGGTTCTCAGGTAGGCCATACTCCAGGAAGGCATTCATCATGCATGAATTGTAAATGTTGATCCAGA
AAGCCAGCTTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E373666] | SGN-U589387 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T186631 [Download][View] | Facility Assigned ID: FA0AAD21BB05FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.963 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 14.5 |