EST details — SGN-E374084

Search information 
Request: 374084Match: SGN-E374084
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179949Clone name: TUS-33-B11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86997 [cLET-44-P4] Trace: SGN-T111531 EST: SGN-E298895 Direction: 5' Facility: TIGR
Clone: SGN-C179949 [TUS-33-B11] Trace: SGN-T186699 EST: SGN-E374085 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374084Length: 575 bp (924 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374084 [] (trimmed) GGGAAAAGGCCCCATGACCCCAAGGGCCAATGGATTTAAGGGAAATTAAAAAGGTAACACCCCAATTTCCCAAAAATTTGAAAGTTTAATTTGAC
CCACTTAATTAAGGGGCATGGCAATTTTTCAATGAAAAAAAGTTTACCAGGAAAGTTATTTAAATTACCCTTTGCCCCTAAACTTGATAAAATTT
AAAATTTTTCCATCCCAAATTTCATCCACAAATTTATAGGGGCCGTTTGGATAAATAAAATCCTTTCCGTTATATCCCTTTTTTTGAGGTATATT
TTGAATTTTAAAATTATTTTCATTGTTAAATTCCCAATCAAATATTTCGAGGTTTTGTTTCATTTTTTTTTTGTTAAAGCTTTTCACTATCACAC
TTGCCCCTTGTTCATATATCCATTTCAAGGCCCCCTGAGGGATACTTTTTTGTTTAACAGTTGCAATGTCATTGATAATTGGGCTATTCCAAAAG
GCCCCTTTGGATCCCAATGGAAAGTAAGCCCTTACATAAACACCTTTTTTTTTACAAAACTTTAAAAATTTTTGCTGCTGCCATGCCACATTTAT
TTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374084] SGN-U601201 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186698 [Download][View] Facility Assigned ID: FA0AAD21CA06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.873 Expected Error Rate: 0.0214 Quality Trim Threshold: 14.5