EST details — SGN-E374335

Search information 
Request: 374335Match: SGN-E374335
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C179946Clone name: TUS-33-B8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C86994 [cLET-44-P22] Trace: SGN-T111535 EST: SGN-E298899 Direction: 5' Facility: TIGR
Clone: SGN-C179946 [TUS-33-B8] Trace: SGN-T186950 EST: SGN-E374336 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E374335Length: 723 bp (935 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E374335 [] (trimmed) ACTGGATTCTCAACTAAATATTTATACATATTTTATCAATTTACTGATACAAATACAGTCCAAGCAAAAGCTACTAGATTCATCTGAACCCGTAC
CTAAAATGTAGCTTCCACAACAGTTTCAGAGAACAAGGTTTGAAGCTGAAAATTCAACAGGAATACAATGTAAGACTTTGTCAGGACAGTGCTTC
AAACCTGATTATTTCAGAAGCAAGAAGTGCTAAGGCCATTCTGATTGGATAGGAATGCGAACAATGAAGCATTAAGCCTGTCTATGCATATGACC
TCCAATTTGATAAAGAGTAAGATGGTGGATCGCCTTGGCAAACAACTCCCTTAAATCAGGACGCTGAGCAATTACATGACGAGCAGCACCCTCAA
GGATGCTCAGGGCTTTTGCTTGCTCAAGGGCCTTACTATTACCAACGTGCAAAGCAAGGTAGCAGAGCAGTTGAAGCTCGTGCACTTGCCCTCGG
TCATACCTCAGCAAATTCATCAGCTTTGGCACTCCATCAAATTCAACAATTGCCTTCGAGTGCTCCACACAGTTAAAATTTTCCGGACATGCAAA
TTTCCCCAAAGCAATACATGCTTCCACAGCAACATCAGTATTTCTATGCCCAAGTTTACCAACTAAATGCTTCACGATTCTCGTGTCCTTTGCAG
GAAATGTCCTAGCCAACGACCCAATTGCCTTAATAGCCGGAATCACCAATGGAGCATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E374335] SGN-U571207 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186949 [Download][View] Facility Assigned ID: FA0AAD21DA04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5