EST details — SGN-E376491

Search information 
Request: 376491Match: SGN-E376491
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174097Clone name: TUS-17-N15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174097 is on microarray TOM1 spot ID 1-1-2.2.17.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6985 [cLEC-37-H19] Trace: SGN-T31236 EST: SGN-E208245 Direction: 5' Facility: TIGR
Clone: SGN-C174097 [TUS-17-N15] Trace: SGN-T189106 EST: SGN-E376492 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E376491Length: 661 bp (916 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376491 [] (trimmed) AAAAGATGAAATATGATTATTAAATAATAAATAAAGACAAAATGAAAAGAAATTATCAAGGTAACAACACAATCACACCAAATCGTTACATAAAA
TGAGTATAACAACGATAGATTTGAACGATACCATATAATAGAATATAAATAACAGTTGAAACAAACATTATATTTAAACTAACAATACAATACAA
TAAAACAGGTAACAATCATCCAAACAAGGTGTAAAAAAAGTAAGAAACTCGATTGCAACGACTACTTTCTTAACTCCTTTTTTGGGGAAATAGAA
GATGAGAATTGAACTCAGGTAAAAAGTTAGATAGTCAACCGATGGAGCTATTAGATTTGCTTATCCTATTTTCCATGAAATAACCAACACAATCA
TCAATAAGTTGTTCATTTCTCTTCCTATCTCCAAACAAACAACTCATTTGTCTTGCATTAGCTCTCAACAACTCACCCTCTTCACTCACTACACC
AAACTTCACAGCTTCAGCCACTGAATCACTAGTGAAAAATCCATCTTTTTCATTTCTTGGTATCTCTACACCAACTCCTTTCTCTTGCAACAACC
TTGTATTCAATCCTTGATCATTCAACACCGGGAACATAACCAAAACCCGCCCAAAACATAGCGCTTCTATGACCCGATTCCATTCACAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376491] SGN-U576693 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189105 [Download][View] Facility Assigned ID: FA0AAD5CG08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.921 Expected Error Rate: 0.0038 Quality Trim Threshold: 14.5