EST details — SGN-E376585

Search information 
Request: 376585Match: SGN-E376585
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174312Clone name: TUS-18-G14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174312 is on microarray TOM1 spot ID 1-1-3.3.16.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7900 [cLEC-40-J6] Trace: SGN-T32083 EST: SGN-E210019 Direction: 5' Facility: TIGR
Clone: SGN-C174312 [TUS-18-G14] Trace: SGN-T189200 EST: SGN-E376586 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376585Length: 670 bp (921 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E376585 [] (trimmed) ATAACATCACAGGGCAGTTTGCCCAAAAATAGCAAACATTGTTGGAAAAGAACATATATATAGACGGGGCTTGTCGCTTAGCGATCCATCTGCTA
TTACAACAAAGAATACAAAAAAAAAAGGCGGAAAAAACAACTTCAAGTGTAATAAACAATGAAAATAAGTTTCGAGCTATACAAACTAATTTTTC
TTGATAAGTATCCTTGTTTAGTTCCCTTTGCCTTCATCTTCATTCAAGATACGATTGCGGAAATCATTGACCATGAGAGGAAGCCCCTCTTGCAA
CGATATTTTTGGTTCCCAGTTTAGTAGTTCCTTTGCTTTGCTAATATCAGGTTTCCTCTTGTGAGGATCATCAGCGGTGTTGGCTTTGAACTCAA
TAGTGGCACTGGGATCAATCACTTCTTTCACCACCCCAGCAAGCTCCAACATGGTAAATTCTCCTGGATTTCCCAAGTTGAAAGGGCCAATGTGC
TCACCATCCATGAGGGCCACTAATCCATCAACCAGATCAGAGACGAATTGAAAACTTCGAGTTTGCTTTCCATCCCCATATACTGTCATTGGTTG
CTTGCGGATGGCCTGCGCAACAAAGTTGCTGACAACACGTCCATCATCTAAACACATACGAGGTCCGTATGTATTGAAAATCCGAGCAATACGAA
CCTCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376585] SGN-U573647 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189199 [Download][View] Facility Assigned ID: FA0AAD6BD07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5