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EST details — SGN-E376710

Search information 
Request: 376710Match: SGN-E376710
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174690Clone name: TUS-19-G8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174690 is on microarray TOM1 spot ID 1-1-1.3.15.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23423 [cLED-5-F4] Trace: SGN-T49698 EST: SGN-E231082 Direction: 5' Facility: TIGR
Clone: SGN-C174690 [TUS-19-G8] Trace: SGN-T189323 EST: SGN-E376709 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376710Length: 632 bp (922 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376710 [] (trimmed) ATTGGAAGGCAATTTTGATTTTTGTTGCTGTTCAATCGATTTTAGTAACTTGAGCTATGGGAAAGAGGAAGGCAAAATCGAAGCCACCTCCAAAG
AAGAGGATGGACAAACTTGACACTGTTTTCAGCTGTCCTTTCTGTAGCCATGGCACCAGCGTGGAATGTCGCATTGATATGAAAAACTTGATTGG
TGAGGCAAATTGCAGAATCTGCCAAGAGAGCTTCAGCACCACTGTCACAGCGCTAACAGAACCTATTGATATATATAGTGAATGGATCGATGAGT
GTGAACGAGTCAACAACTACGAAGAAGAAGACGTTTCTTATAGATCCTGATGAACTGCTCAGGACTATGCGCGTAGACCATTGGCAATAGTTCTG
TCTCACTGCCTCAGAAGACTGCGAAACTCATCTAGGCGTCGCTGGAGTGTAATAAGTAAACTCCATTTAAAGAGGCTTTCTATGTCTAAATAGTT
TGAAATAGACGCAGAACCTATCTTGTTTATATTCTGCTTGTGCAAGTAGTTTCTATGGAATCGGATTAACGACGTATCTACCTAATGTCAAGTAG
TTTTATTTCTCTAATCGCCTCGATTATTTCACTGAGTACTTGTTGAAGGGACACCTGTTACG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376710] SGN-U593282 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T189324 [Download][View] Facility Assigned ID: FA0AAD7BD04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0059 Quality Trim Threshold: 14.5