EST details — SGN-E379413
| Search information |
| Request: 379413 | Match: SGN-E379413 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168564 | Clone name: TUS-3-H2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168564 [TUS-3-H2] | Trace: SGN-T317 | EST: SGN-E379254 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379413 | Length: 719 bp (758 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379413 [] (trimmed)
AGAAATACCACAGTTACAAACTTATTCCCTTTTTTACAAGAGAAATAAGCCATCTCTCCTTATGTACATCACCCCCAACAACTAAAAGTCAAAAC
AAACGACAAAAACAAGAGGACCAAAAAAGTCATAAGAACCTAACTAGTGTACCCTTACATTCCATTTCCCAAAATTATATAGCACCTTTCCCCGA
TTTTGCATGGCTGAAGTTTATTCCTTTACAAGAATAGACATGGATTTATGGACATTCAAAAACTGCTCAGCCTTTCAAAAACTAAATAGTAATAT
AAAGAGGAAAGACAACACTAAGTAACCTATGAGGCTCCGAGGTTATGTAACTGTTACCTAGGCTTTGGTTGTGATGCAAATGACCACACTGGTCG
AACATGTCTTTGAGCTGAAGGGCTAGACAGTAATGTAGCCTGAGATCGAGTTACCATCTCAGCCATGGAAGGGGTTTGATAGGCTTGGACAAGAC
TTGATCCACCTGTGGAGTCACCTCGTGCTGTTGCTCTCTGCCACGAGTGTGAGCTCAGCCCTGACAAGATATATGCCCTTCCTGATGCTTCGTAT
ACATTTCTGCTTGCCATCCTCTCCTGCATCTCCTTGAGCTCAGCATCAAGTGCCACACAAAGCCGGTCATGAGATTTAGCAGACTGTGACTCTGA
CAACAACTTTCTGGAGTTCTCTAGGATGGAAGTCGCGCCAACTAGGTCTCCTTT
AAACGACAAAAACAAGAGGACCAAAAAAGTCATAAGAACCTAACTAGTGTACCCTTACATTCCATTTCCCAAAATTATATAGCACCTTTCCCCGA
TTTTGCATGGCTGAAGTTTATTCCTTTACAAGAATAGACATGGATTTATGGACATTCAAAAACTGCTCAGCCTTTCAAAAACTAAATAGTAATAT
AAAGAGGAAAGACAACACTAAGTAACCTATGAGGCTCCGAGGTTATGTAACTGTTACCTAGGCTTTGGTTGTGATGCAAATGACCACACTGGTCG
AACATGTCTTTGAGCTGAAGGGCTAGACAGTAATGTAGCCTGAGATCGAGTTACCATCTCAGCCATGGAAGGGGTTTGATAGGCTTGGACAAGAC
TTGATCCACCTGTGGAGTCACCTCGTGCTGTTGCTCTCTGCCACGAGTGTGAGCTCAGCCCTGACAAGATATATGCCCTTCCTGATGCTTCGTAT
ACATTTCTGCTTGCCATCCTCTCCTGCATCTCCTTGAGCTCAGCATCAAGTGCCACACAAAGCCGGTCATGAGATTTAGCAGACTGTGACTCTGA
CAACAACTTTCTGGAGTTCTCTAGGATGGAAGTCGCGCCAACTAGGTCTCCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379413] | SGN-U582422 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T861 [Download][View] | Facility Assigned ID: 237_H02_TUS03H2.Td_026.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 20.5 |
Working
