EST details — SGN-E379703
| Search information |
| Request: 379703 | Match: SGN-E379703 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C167771 | Clone name: TUS-1-G1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C8147 [cLEC-4-I14] | Trace: SGN-T24434 | EST: SGN-E201484 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C167771 [TUS-1-G1] | Trace: SGN-T1163 | EST: SGN-E379981 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379703 | Length: 763 bp (797 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379703 [] (trimmed)
TTGATTCCAATATGACAGTACATCAATCTTTCGAGCATTTATCCTTACATATATCATCACTTTAAACAACATCTAACAAGTTACAGCCCTTTTTG
AGTTGCCTAATTAACTACATTGCCTAATGTTCTAAGGGAATAAAGAGATGAATCAGCTACCGACTCTACTCACAAAGAGCTAAGATAAGATGGCA
ATGTATGTGAATAAAATAATATTTTAAAAAAACAAACTAAATGCGAATCACTAAAGAGATCTCTTACGTTTTGCTAGGGTACATTGTATCTCAAC
AAGTATAAAGATTCAATTTGGAGAAGATTTTCACCACGAAATTCCTCAAACCAATACCAGTCACTGGAGCTTTCCAAAATCAGCACTTTACTTAA
CACTACTGATCCCTCCATCTTGGACTTGTTATAGGAAATAATCCTGACGGCGACAAAGGAAATCCATAACCAGGAGATGGGGGAAGTTGTGGTCC
AGGGCCTAAAATTCCAGGCTGAGCCATGTGAGAGAAGGAGAAATTCGGAGTCAATGGTGGAGGTCGCTGCACACCAGGAGAAAGCAATGGATAAG
GTGATCGAGGGGATAACATGTTGAAGAAGCCAGTGGGTGATTGCAAAAGGAACTGAGAAGTGGGTGAAGGCAAAAAAGTTGGCCCATTTATTCCC
GGAGATGGAAGAGGAGGAGGCGGACCATTCATCCTAGGAGATGGGAAAGGAGGATGTGGGCCATTCATTCGAAGGGGTGGGAGAAGAGGTGGACC
ATT
AGTTGCCTAATTAACTACATTGCCTAATGTTCTAAGGGAATAAAGAGATGAATCAGCTACCGACTCTACTCACAAAGAGCTAAGATAAGATGGCA
ATGTATGTGAATAAAATAATATTTTAAAAAAACAAACTAAATGCGAATCACTAAAGAGATCTCTTACGTTTTGCTAGGGTACATTGTATCTCAAC
AAGTATAAAGATTCAATTTGGAGAAGATTTTCACCACGAAATTCCTCAAACCAATACCAGTCACTGGAGCTTTCCAAAATCAGCACTTTACTTAA
CACTACTGATCCCTCCATCTTGGACTTGTTATAGGAAATAATCCTGACGGCGACAAAGGAAATCCATAACCAGGAGATGGGGGAAGTTGTGGTCC
AGGGCCTAAAATTCCAGGCTGAGCCATGTGAGAGAAGGAGAAATTCGGAGTCAATGGTGGAGGTCGCTGCACACCAGGAGAAAGCAATGGATAAG
GTGATCGAGGGGATAACATGTTGAAGAAGCCAGTGGGTGATTGCAAAAGGAACTGAGAAGTGGGTGAAGGCAAAAAAGTTGGCCCATTTATTCCC
GGAGATGGAAGAGGAGGAGGCGGACCATTCATCCTAGGAGATGGGAAAGGAGGATGTGGGCCATTCATTCGAAGGGGTGGGAGAAGAGGTGGACC
ATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379703] | SGN-U598947 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T221 [Download][View] | Facility Assigned ID: 227_G01_TUS01G1.Td_006.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 20.5 |
Working
