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EST details — SGN-E390749

Search information 
Request: 390749Match: SGN-E390749
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185495Clone name: TUS-47-I13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185495 is on microarray TOM1 spot ID 1-1-4.1.9.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79229 [cLES-8-D3] Trace: SGN-T99087 EST: SGN-E288567 Direction: 5' Facility: TIGR
Clone: SGN-C185495 [TUS-47-I13] Trace: SGN-T192076 EST: SGN-E390750 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390749Length: 602 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390749 [] (trimmed) GTAACCACATTGTAGGAAATGTTTTGATTGATGCTTCATTTTTAATTGATCCTAATGCTGTTATCGTACCTAATGTAATTATTGGACCATATTGC
ATAGTTAACGAAGGAGTCAGATTGAAGAATTGTGTTCTTTTAAAGGGAGTATTAATCAATGCAAATAGTTGGATCAATGAATCCATTATTGGATG
GTCATCAACTGTGGGTAAATGGGTCATAATTGAAGGCGTTTCTGTTTGTGGTGAAGATGTCTATGTAAAAGATGAAGTCTATATTACTTACAGTT
TTATCTTACCACATAGAGGTATTACAAGTAACATCTATAACAAAAATACAGTTATAATGTGAAATATTATATTCAAAAATATATTATTATATATT
TAATGGAATATTGTATATTTATATAAGATTCTCTACATCTCTACAAACCATTTTATTAATAATGTATATTTATATCTAGCTCAGATGAGAACAAT
TCCTATCTCTTCTGGTTGAAGCATGTTGCTTTCTATTTTCCAATTTGTATAGATAATAACTTATTTCTCCCTTTCCTTATTTTAAATAATAATTC
CTATAAGATTTTTCTTTAACTATACCCTTTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390749] SGN-U601345 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192075 [Download][View] Facility Assigned ID: FA0AAD35AE07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.914 Expected Error Rate: 0.0152 Quality Trim Threshold: 20.5