EST details — SGN-E391298

Search information 
Request: 391298Match: SGN-E391298
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185527Clone name: TUS-47-J21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185527 is on microarray TOM1 spot ID 1-1-4.2.9.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75313 [cLES-13-J23] Trace: SGN-T100436 EST: SGN-E286123 Direction: 5' Facility: TIGR
Clone: SGN-C185527 [TUS-47-J21] Trace: SGN-T192352 EST: SGN-E391026 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E391298Length: 761 bp (820 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391298 [] (trimmed) AGCTATTGAAATAAATAAAAATCTTATTACATTCAACTTTAACATATTTCAATTGAACTTACAAAAATCCAATTTTTATTGACACACAAAATCTT
GAAATTCCTTTGAGGAGTACTCATATTAAATCACCATCACGCAGAATGTAAGCTCGATAACGGATAACCAATTCATCTCTTGAAGGAAAATATTC
CTTGTTTTGGATGCAATATTCATCTCTCCAAGCACAAAAATTGTGGAAATTTTTCACTTGTCGCTAAAACGACTCCAGATACTTCTTCAAGAATT
CCCAAATAAAGTGCTGCACCATTTGCAAAAATATCATCAAATCCAAATTTGTCACCAACAAAGTACTTCTTGTCCTTGAACTCATTATCAAGAAT
TTTCAACATCTCATAAGCTTCCTCTTTAGCTTTCTCTTGTTCCTCTCCTTTAAAGAAGAAACTTTTCCACACTGCTGACCCCTTATCATCGACAT
ATTTAGCCCAAAAACGCGCTAAAGCTCGATCATAAGGGTCTTTAGGCAAAATGGAAGGGCCTTCAAATGCCTCATCAATGTATTCAAGAATGACC
ATAGACTCACAAATGGGCTTGCCATTGTGAATTAGCACTGGAATTTTCTTGTGAATTGGATTTGATTCTAGAAGTAAAGAACTCTTATTTTGTAA
ATCTTCTTCTATAAATTCATATTTCACTCCCTTAATCTTTAGAGCCCATTCAACTCTATGATTAAAAGGGCTATAACTTAGAACCAAGCAACTTC
C
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391298] SGN-U591800 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192624 [Download][View] Facility Assigned ID: FA0AAD35CE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.932 Expected Error Rate: 0.0212 Quality Trim Threshold: 14.5