EST details — SGN-E391910

Search information 
Request: 391910Match: SGN-E391910
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176530Clone name: TUS-24-C24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176530 is on microarray TOM1 spot ID 1-1-1.3.9.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26946 [cLEF-42-B12] Trace: SGN-T60656 EST: SGN-E247612 Direction: 5' Facility: TIGR
Clone: SGN-C176530 [TUS-24-C24] Trace: SGN-T193066 EST: SGN-E391740 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391910Length: 719 bp (811 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391910 [] (trimmed) AGAAAATATTTCATGGATACAGATAAAATTAAAATAACAACAATTAGCTCATCTTAGTCCATAATAGGAAGCAACAATAACATAATCCATAATCT
TCCATAAATTTACAAATGCATGTTTCAAACTTATATACGCATCTGCTAGGTGGTATTCAAGAACAAGTAAAGAGTTGCCTCTCAAAACAATGAAA
AGTATGTCTAGTTGTTGAAAGGCCCAAATACCGATGGCTAGAGGACCAATTATTCTAGTTTCTTGATGTCATGCAATATTTGGGAAAATTACACT
TGTCCATTTCCAGATAGAAAGGTAGTCTTTTCTATCGGCCAAGGAGCCCCCGCCATCACTGCCTCTATCTCTTCAATCTTCCGCGGACATTTGCT
CATGTTAATGCATCCAATGGAAGTAACACACACATCACTTTCAATTCTGACTCCACCAAAAGGTCTAAACCTGTTGATCTCAACACGATTGAAAA
ACTCTGAAACTGCTGGACTCTTCAAGGCAGGAAGTAGCAAGGCATCAATGAAGTAACAACCAGGCTCCACAGTGATCACCATTCCCTTTAAGAGC
TTTCTGCTCGTACGTAGAGAGCTCAATCCAGGTTCTTTTGGTCTTTTAGCTCCCTTCAAGTAACCCCCAGGATCATGAATATCAATTCCAAGAAG
GTGCCCCAATCCATGAGGCATGAAAACAGCACCAAGTCCCTCGGCCATCATTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391910] SGN-U589649 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193236 [Download][View] Facility Assigned ID: FA0AAD12BB12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0066 Quality Trim Threshold: 14.5