EST details — SGN-E392752
| Search information |
| Request: 392752 | Match: SGN-E392752 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C181106 | Clone name: TUS-36-B16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181106 is on microarray TOM1 spot ID 1-1-1.2.15.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C18082 [cLED-21-O3] | Trace: SGN-T53862 | EST: SGN-E240461 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C181106 [TUS-36-B16] | Trace: SGN-T194079 | EST: SGN-E392753 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E392752 | Length: 529 bp (834 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E392752 [] (trimmed)
CCACATAAAACAGGTCTTTATATCATCAAAAGGCAATTGACAAAATTACAAGGCCCATTTTCCCCATATTGTCAACAAACAAAATCCCCAAACCC
GTCTATTAAAATTAACAAATCAAAAAAAGTGAAATTAAAAAAATTTATACCCCCTAAATATCAATATTCTACAAAATTTAAAAAATAAAAAAATA
ATTTAAACTGAGGGGGCGTCTACAAAAACTTCTTTGAACATGTCACCCCCCCCTTTTGCTGTAAAAACCATCCCACCATCCTTCCCCTCATCACG
GGAAAAATCCCTTTTCTCAATTTTTGCGTGACCTGCAATGAAAATCATCCTTTGACCTCTATCCATGCCAACCCTCAATTGCCCTTGCAAAAAAA
CCCTTCTCAAAAAGGACCAATTACTTTTAAATCCACATGAGGTTGCCGGAAGGAAAAAAACCCAAACACCAACCTTCCCCAGCAACTTGAACTCT
TTCAGGCAATTTTCCCATACAACCCTGCTACTCTAAGGATTTGCAATTTTCTTT
GTCTATTAAAATTAACAAATCAAAAAAAGTGAAATTAAAAAAATTTATACCCCCTAAATATCAATATTCTACAAAATTTAAAAAATAAAAAAATA
ATTTAAACTGAGGGGGCGTCTACAAAAACTTCTTTGAACATGTCACCCCCCCCTTTTGCTGTAAAAACCATCCCACCATCCTTCCCCTCATCACG
GGAAAAATCCCTTTTCTCAATTTTTGCGTGACCTGCAATGAAAATCATCCTTTGACCTCTATCCATGCCAACCCTCAATTGCCCTTGCAAAAAAA
CCCTTCTCAAAAAGGACCAATTACTTTTAAATCCACATGAGGTTGCCGGAAGGAAAAAAACCCAAACACCAACCTTCCCCAGCAACTTGAACTCT
TTCAGGCAATTTTCCCATACAACCCTGCTACTCTAAGGATTTGCAATTTTCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E392752] | SGN-U595931 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T194078 [Download][View] | Facility Assigned ID: FA0AAD24DA08FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.893 | Expected Error Rate: 0.0232 | Quality Trim Threshold: 14.5 |
Working
