EST details — SGN-E395554

Search information 
Request: 395554Match: SGN-E395554
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183912Clone name: TUS-43-G14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183912 is on microarray TOM1 spot ID 1-1-3.3.19.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C2342 [cLEC-15-K14] Trace: SGN-T26570 EST: SGN-E203469 Direction: 5' Facility: TIGR
Clone: SGN-C183912 [TUS-43-G14] Trace: SGN-T196881 EST: SGN-E395555 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E395554Length: 225 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E395554 [] (trimmed) GGAAGAAAATTATGTATATTTCTCGATCACTTTACTTTACAATTAACTAGTTAATAAATCCACTCCACTAATTAATGGTTAATTATAAAACCTTT
TAATGGATTTGTGAAGGAATACCATAAAAGTGAGGCTTTTGATCTCCGATGGAAAAAGAAATTTTGGTTGAATTGACAGTGGCGGCGCCCCCGTA
ATGCCTCACCCAAGCACGGGCACATACTAGGTGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E395554] SGN-U570501 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196880 [Download][View] Facility Assigned ID: FA0AAD31BD07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0322 Quality Trim Threshold: 14.5