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EST details — SGN-E396569

Search information 
Request: 396569Match: SGN-E396569
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184050Clone name: TUS-43-M8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184050 is on microarray TOM1 spot ID 1-1-1.1.19.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3555 [cLEC-20-P3] Trace: SGN-T27823 EST: SGN-E206041 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396569Length: 525 bp (918 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396569 [] (trimmed) TCTTAAGCGAGAGATATCTACAGTTTGAAACCCTCTAGGGTACTAAGAATAGGGTAAAAATGCCCATTACAACCATTTTTTCTCTTTTAAAAACT
AGAAGGCAAAAGAAAATTTGGTTGAAACAAGTCAGTGATTGGACATTGAGGGAAAAAAACAGCTTTTTACGGTAGATTTCAAATTACAGAACAGA
ATGTACCGTGTTGCTTCGATTTGAAAAATATACATGAAAACCACTCGGGGCATTTCGTCAACTCTACTGAGCTACTGGCATAGAGTGAAGTCGAG
CTCCAAACAAAAGAATGGTCTCGAGAATAATCCTCAACCAGCAAAACTCCACTTCTGAAACATACCTGCTGGCAAACAAGCGCAAGTATTGGAAT
CACAAAAAGTAATCTGGAGTCTTCCTTGTGGTGTCGGGCTCTATCTGTCGAGGAGCTGGGTCAAACTGAAGGAAATTCTGCTCCATGTTTTCCCC
TATTTCTAGAATGGCAACCATATTACCCCCACCGGGTAACAATAGTTTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396569] SGN-U567354 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197895 [Download][View] Facility Assigned ID: FA0AAD31BG04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0193 Quality Trim Threshold: 14.5