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EST details — SGN-E396630

Search information 
Request: 396630Match: SGN-E396630
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183932Clone name: TUS-43-H10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183932 is on microarray TOM1 spot ID 1-1-7.4.19.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C7683 [cLEC-39-N16] Trace: SGN-T32014 EST: SGN-E208724 Direction: 5' Facility: TIGR
Clone: SGN-C183932 [TUS-43-H10] Trace: SGN-T197957 EST: SGN-E396631 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396630Length: 420 bp (896 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E396630 [] (trimmed) ACGATGCGAACTCTCATTTGAGAGGGATGTTGAATTTCTTCAACAGATTGATCAAGTAATCTAATCAACAACGAGTTTACATTGATTGGAAAAGC
CTTGGTCTTTTGCTAGAAGCTACACAATTTTTGATTCCTATTTACTTAAGAAGACTCTAAAATGAGACTACTTGTTTCAGCACCACAAAGTGAAT
GATTATGTTCTCCTTCGTAGGTAACGATCAACATAGTTGGATCATCCAATGCTCTTTCAACATGTTTACGTGCTGGACACCCTCTTACACTACTA
CACTTGTAATATCCCCTTGGATGTGGAGATCCTTTGATTGGCTTCTGTCCATATTTTCTCGGCGAGTAATCATCCGGTGGGATAGTCTGAGGGTT
TCATGCGTATTGCCGGTACGCGAACTACACCTCATTAGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396630] SGN-U565155 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197956 [Download][View] Facility Assigned ID: FA0AAD31DD05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0259 Quality Trim Threshold: 14.5