EST details — SGN-E397555

Search information 
Request: 397555Match: SGN-E397555
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184919Clone name: TUS-46-A13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184919 is on microarray TOM1 spot ID 1-1-4.1.12.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C10874 [cLEC-6-I16] Trace: SGN-T23966 EST: SGN-E202305 Direction: 5' Facility: TIGR
Clone: SGN-C184919 [TUS-46-A13] Trace: SGN-T200074 EST: SGN-E398748 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E397555Length: 590 bp (867 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E397555 [] (trimmed) GGCTTCAAAAACTTAGGCTACATGTTATTTAAAATTGATGAAAATTACTAACTTATAAAAAAGCTAATTTCTATGGGCCCTAAAATACCAAAAAA
AATTTGGGGCTTGATCAACAAAATAAATGTTGCAAAAATCCCCTGTTGTAAAACCTTTTTGCCCCCCAATTCTTCCAACAGCTTGTTGTTGCCGC
GGATTATTACTATTATTATTACCCCCCTTATTATTATTATTATTATTAAAACCCCCCATTGAAGAAGAGGTAAAATTACTTGCCCTTGGATCCAT
TAACGGGGTGTATGTTGAAGAAAAAAGTGACAAAAGATCCCGGGAATTACTGTAAAAAGACCCTTTAGGCATTAATTGTTGAAAATTGAATGTTG
AAATGTTGTAAATTTCTTCATTCCCCCCCCCCCTTGAATCCCTATCTGAAGATCCCTCTTTTGAACCCCCAAAATCCGAAAAATTCTTCACACTT
ATTCAAAATTTCTTGGGGCCTTTGAAATACAGGGGAAAAAAATGTTTCCCCCCCAACCTTCTCTTTCCCCCCTTTTAACTCAATAATCAACCCTT
CTTTTTCTTGTTCAACTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397555] SGN-U593767 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198881 [Download][View] Facility Assigned ID: FA0AAD34AA07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.890 Expected Error Rate: 0.0218 Quality Trim Threshold: 14.5