EST details — SGN-E397931
| Search information |
| Request: 397931 | Match: SGN-E397931 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C181481 | Clone name: TUS-37-B7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181481 is on microarray TOM1 spot ID 1-1-2.2.12.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C34054 [cLEG-29-I15] | Trace: SGN-T68764 | EST: SGN-E254498 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C181481 [TUS-37-B7] | Trace: SGN-T194229 | EST: SGN-E392903 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E397931 | Length: 257 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E397931 [] (trimmed)
ACAAAAAGAATAAAGAATATATTGCTTCCTCAAATAATTAGGCAAGGTTTTTTCCCCTGATATCCCAAAACAAATTAAAGAAGATAAAAGAAAAC
CAAGATAATATTACAGACCACATTCATAAATTTGATCCTTTATAACCTTGAACGTTTGGATTCATGAAAAAGGCCTTGAGAAAACCTTTTATAAT
CTTGTTTTTTTTTGTAGATCATGTATTTCTGAAGAACCCATTCGAACTCACGGTTCGATCCCACCTC
CAAGATAATATTACAGACCACATTCATAAATTTGATCCTTTATAACCTTGAACGTTTGGATTCATGAAAAAGGCCTTGAGAAAACCTTTTATAAT
CTTGTTTTTTTTTGTAGATCATGTATTTCTGAAGAACCCATTCGAACTCACGGTTCGATCCCACCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E397931] | SGN-U590941 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T199257 [Download][View] | Facility Assigned ID: FA0AAD25CA04RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.854 | Expected Error Rate: 0.0218 | Quality Trim Threshold: 14.5 |
Working
