Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E417641

Search information 
Request: 417641Match: SGN-E417641
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C271195Clone name: STM-25-H2
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C271195 [STM-25-H2] Trace: SGN-T269779 EST: SGN-E417642 Direction: 3' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E417641Length: 531 bp (1004 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E417641 [] (trimmed) GCAGTGGAATACATGTCTATCAATCAAACAGGTCTTTATCTTTTTGGTCAAGGTGGTTCTGTAGTTGTGATAATGGTGAACTTGTTACAATCCAC
TTTTAGAATTGCCAAATTGGATGGTTCAGGTCAGTTGATCGTTATTAGTTTTGTTGGCTCTGACATCAAACGAGATTTTGTTGGGCCAGTGGATG
GGTGTAGAGTACCTTATGTTTGCAAAGGGCTTGGTGTATGCACCTCTGATGTGTTATCAGATAATCCTAAATGTTCCTGTCCTGCTAACTTCAAT
CTTGGATCACATAATTCAAGCAGCTGTGAGCCTAGTGATAGATCCTATTCTTTGCCAGTTTCTTGTAATTCCACCAACCACAGTAATCTGTCGAA
TTCTTCCTCCATGTCGTACATAGGACTTGGCTTTGGTATGGACTACTTCACTACTGATTTTACCAAGCCCTTTAGGGATGGGGTAAATTTGTCCG
TTTGTCAAAATCTCTGCTCAATAGACTGTTCATGCCTGGGGATATTTTATGCAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E417641] SGN-U290372 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T269778 [Download][View] Facility Assigned ID: STMDV37TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0121 Quality Trim Threshold: 14.5