Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E420417

Search information 
Request: 420417Match: SGN-E420417
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C273291Clone name: STM-31-O5
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E420417Length: 652 bp (955 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E420417 [] (trimmed) CTCTCATATCCTCGATTCAAAGGATTTTTCAGTTGAACTATGATCAGATGTTTCTGCTTGACTCGATTCAGAGGGTTTTTCAGTTGAACCATGAT
CAGATCTTTTTGTTTGTCTCTTGAGATAGTCACTCCTGTTAAAACTGAGTATTGAATGTATATGAAACTAGAAGATTTAAGGAAAAGCTTGAATC
TCCCTTAAAGCTTCATAGAGAAACTATATAGTGAAATGAATACAATGAAGAGCACTTTAAAACCTACTCTACAACTCATCTATATCATGCCTTAT
ATACATCTGACTACTAACCAACTTACATAAATGAAAATATCTTCTAACAGAATTCATCCATAACTGACTAACAGAATCCTTAACTAACTTGACAG
CTGGACTAATTAACAGTGACTTAACATTTACATTCAGCTCTTTGCAATTTCTTTGTTGTATTCTCCAATAGTCCCCTTCAAGCTGGGTGATATGA
AGATGTTCTTCATTCCTTGCTTGGACATGAGATGTGAATGCTGATATTTACCAAACCCTTTAGTAAAAATGTCAGCAGGCTGTTCAGAAGAACAT
ACGTTGTGACGACCCTAAAAACGAACTAGTGAAACTAGAGCCTCACATGTGAGTTTGGAGTTGGGAACTTGATGAAGTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E420417] SGN-U297855 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T272554 [Download][View] Facility Assigned ID: STMEQ87TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.944 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5