Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E422701

Search information 
Request: 422701Match: SGN-E422701
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C274190Clone name: STM-40-H22
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C274190 [STM-40-H22] Trace: SGN-T274837 EST: SGN-E422700 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E422701Length: 600 bp (907 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E422701 [] (trimmed) TTTCTTTTTTTTCACAGTTAACAGAAATATTACCAAATAGGCAAATACTAGTGACAAATACTTATTGTAAACTTGAAACAACTGCAAACTACAAA
AATTAAAGCAATCCAACCAATCCCATTTAGCATATAATGCTTGCAAGAATAAACTGTATGTGGAACGAAACCAGTAGGCGAAACCCTCCACTCCA
GCTTTAGGTGAGTTAATGGATGAAATCGAGCACTATGATCAGTGCTGTTGAGCCTGCCGACTTGGAGCACCACCTGATTGCATGTCTCCCGATGC
ACCACCTCCAATAGATGGATTTCCATAAGCACCATCACTTACGCCATATCCACCATAGCCATAACCTTGATTTCCATATCCTGTGGCCCCAGTTG
GAGACTGGCCAGTAGCAGATCCTCCGTTAGCAGCCCCACCTCCACCACCTGCACTTGAAGCACCCCAGGATGCATTACCATAGCCCATATTTCCA
TATCCAGAAGGAATCTGAGAGCCCCACGAGCTTCTTGGTCCACCAGCTTGACCACTACCATAACCAGTACCGGGCACATTTGGATTTCCGAAAGC
AGCAACTGCAGGACTACCATATCCAGGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E422701] SGN-U287956 Solanum tuberosum Build 4 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T274838 [Download][View] Facility Assigned ID: STMGD47TV
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0112 Quality Trim Threshold: 14.5