EST details — SGN-E537721
| Search information |
| Request: 537721 | Match: SGN-E537721 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188928 | Clone name: TUS-56-H14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C49167 [cLEI-7-E9] | Trace: SGN-T81111 | EST: SGN-E266886 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188928 [TUS-56-H14] | Trace: SGN-T338599 | EST: SGN-E537724 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537721 | Length: 575 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E537721 [] (trimmed)
AATTTGAAGGGGGACCCATATAAATTACCCATGGTGCAATTTCTATCGTTTTCGGTGAAGAGAACCCGCAACCGCAAAGTTGAGTCTTTTCAAAA
TCAATATTTTTATAAGGAACTATTCTTCCCAACAAAGGGAGAAAAAACCGATTATTTTTAAGGGACCCCCCCTTTCCACAAAAAAAAAGTCTAAT
GGTCCCCAGCTCTTTCCATCAAAACTTCAGAACAGCAGAAATCATTTCTTGGTGAAAGCAACAATATCACAGCTCTGCACATACTCATTGGTAGG
GCCAACTGGTAGAAAATTCTCAAGGGGATCATCCCCGGGGACCAAATCATCCCCAAGGGGAAGCATAATTTGCAGCTTCTTTATACCATATCCCA
CAGGGACAAGTTTAGATGCCCCAAAAGTCAATCCTTCCATAGTAACACTTCGAACTGGTTCTTCAAGCTTTTTCATATCAGTCTCATCATCCCAT
GGGTTGGCATCCCTGAGAACAGAGGACTTGCCAGATTCTTTCTTCTTCCCTGAAGCCTTCAATGGTGGAGCGCGTTCTTCAGCAGCTTTCTTTTC
CCCTT
TCAATATTTTTATAAGGAACTATTCTTCCCAACAAAGGGAGAAAAAACCGATTATTTTTAAGGGACCCCCCCTTTCCACAAAAAAAAAGTCTAAT
GGTCCCCAGCTCTTTCCATCAAAACTTCAGAACAGCAGAAATCATTTCTTGGTGAAAGCAACAATATCACAGCTCTGCACATACTCATTGGTAGG
GCCAACTGGTAGAAAATTCTCAAGGGGATCATCCCCGGGGACCAAATCATCCCCAAGGGGAAGCATAATTTGCAGCTTCTTTATACCATATCCCA
CAGGGACAAGTTTAGATGCCCCAAAAGTCAATCCTTCCATAGTAACACTTCGAACTGGTTCTTCAAGCTTTTTCATATCAGTCTCATCATCCCAT
GGGTTGGCATCCCTGAGAACAGAGGACTTGCCAGATTCTTTCTTCTTCCCTGAAGCCTTCAATGGTGGAGCGCGTTCTTCAGCAGCTTTCTTTTC
CCCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537721] | SGN-U575408 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338596 [Download][View] | Facility Assigned ID: TUS56H14_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.927 | Expected Error Rate: 0.0250 | Quality Trim Threshold: 14.5 |
Working
