EST details — SGN-E538043
| Search information |
| Request: 538043 | Match: SGN-E538043 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189114 | Clone name: TUS-56-P8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C46550 [cLEI-12-P10] | Trace: SGN-T82217 | EST: SGN-E267798 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189114 [TUS-56-P8] | Trace: SGN-T338916 | EST: SGN-E538041 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E538043 | Length: 624 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E538043 [] (trimmed)
CCCGGGGAACTTATATATTATAATTTACTTAAAAAATTCAACACTCCCATGGATTCTTGAAAATATAGAACTTATGGATCATGTCATGACTGATA
CCACTAAAAATAACCCTTTACATTATCAGCGATGCAACAGGAAAGTTTTATCTACTTCTTATAAAAAGAAATAAATGGTAGGATCCGTTGTGTTA
AGGGAGGTCCAAATCTTCATATTTATCCTTTTTAAATATCTCATGAATCAGTCATTTCCGAATGGACCATTTTGTACACGACAATATACATGCTT
ACTCAAATCTCACGAAAAACGTAACTTCCCAAAATCAAACAGTTCACTTCTTTGAAACATATGCATAGTATTGAGCCATAGGAACAACGAAAGCA
ATCACTAACAGCCCACCAACCACAAGTGTGAATTGTCCTCTTTTCTCATCAGTTTCCTCTCTGGATTTAAAGTTGGACTCTCTTTTGTTATCCTT
GAGTTGGGGACCACCAGGATCTGGAAGGCCATCAATGGCTGCAACAAGACGTCTGGCAGTGCTGAAAACTGCTTCATTGTACTTCTCTTCAGTAG
CCAAAACTGGAAGGTTCTCTGAGACGGTAGCATCAAAAACAGTATCTCCAACGG
CCACTAAAAATAACCCTTTACATTATCAGCGATGCAACAGGAAAGTTTTATCTACTTCTTATAAAAAGAAATAAATGGTAGGATCCGTTGTGTTA
AGGGAGGTCCAAATCTTCATATTTATCCTTTTTAAATATCTCATGAATCAGTCATTTCCGAATGGACCATTTTGTACACGACAATATACATGCTT
ACTCAAATCTCACGAAAAACGTAACTTCCCAAAATCAAACAGTTCACTTCTTTGAAACATATGCATAGTATTGAGCCATAGGAACAACGAAAGCA
ATCACTAACAGCCCACCAACCACAAGTGTGAATTGTCCTCTTTTCTCATCAGTTTCCTCTCTGGATTTAAAGTTGGACTCTCTTTTGTTATCCTT
GAGTTGGGGACCACCAGGATCTGGAAGGCCATCAATGGCTGCAACAAGACGTCTGGCAGTGCTGAAAACTGCTTCATTGTACTTCTCTTCAGTAG
CCAAAACTGGAAGGTTCTCTGAGACGGTAGCATCAAAAACAGTATCTCCAACGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E538043] | SGN-U578078 | Tomato 200607 | Build 2 | 55 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338918 [Download][View] | Facility Assigned ID: TUS56P08_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0093 | Quality Trim Threshold: 14.5 |
Working
