EST details — SGN-E538906

Search information 
Request: 538906Match: SGN-E538906
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189664Clone name: TUS-58-G6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73062 [cLER-3-A5] Trace: SGN-T92215 EST: SGN-E277327 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E538906Length: 544 bp (859 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E538906 [] (trimmed) CAGGAAGTTTCGGTAAGAGGAGGAACAAGACACACACACTGTGTGTTAGATGTGGTCGACGTAGCTTCCACATCCAGAAGAGTCGTTGTTCAGCT
TGTGCTTACCCTGCTGCTCGTCTCAGAAAATGTATGCTTTTCTTCATTTTTGAAGCACCCTCTTGTGATTTTAGATGTTTCAATGTTAGAAATTG
ATTTAAGTATGAGCTTGTTGGTTGTGGTTGTTTGTATAAGTAATTATGTGAGGTATCCGAGGGATAAAGTAAGTTTAACTGAGCTAGTAGTTGCT
ATTAGGTTATAAAGTTGATTTTTTTTTTGTATTATCAGCTAACTGTGATTTTGGTTAATGAAACTGGGTATATAGAGTGAAATAGTGGAAGTGCT
TGGTAATATGAGTTCACTTGTTGGATCTAGCATGATTTAGGAGGGATTTGGGTTAGGGGACTTTTTTGTATGATATGTTTTTAATTGGATGTTGA
AGGATGATCACGTGCACAAACAAAATTTGTTCTTGCCCAGGCCCTTAAATCTGGTTACACCCCATTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E538906] SGN-U590249 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T339781 [Download][View] Facility Assigned ID: TUS58G06_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.934 Expected Error Rate: 0.0020 Quality Trim Threshold: 14.5