EST details — SGN-E540715
| Search information |
| Request: 540715 | Match: SGN-E540715 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190719 | Clone name: TUS-61-C5 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C88063 [cLET-6-N17] | Trace: SGN-T103984 | EST: SGN-E291731 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190719 [TUS-61-C5] | Trace: SGN-T341593 | EST: SGN-E540718 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E540715 | Length: 539 bp (909 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E540715 [] (trimmed)
GAAGAATTGAAAAATATTTGCCCCATTTTTCTGAACCAAAATAATCTGATTTCTCAAAAATTTTTGGGATGTTTGGCCAAACCCTTTCTAAGTAA
CCTGGGTTTTAAAAAGGAAGGGAGGGAAACTGTTTTTTCTTCCCCTGGTTTTCAAAAAAACAAACCACATTGATCTCCTTTTAAGGGGAAAGGAC
ATGTCCATACTGGAAAATTTCCCGTTAAAATTTAATCAAAAAAACCCCGTCCCATGGCCTGGTACCCCAATCCCCATTTTTTTACCAATGAGGTC
AACAACCCAAAAAATTCAAAAGGGTTTCCCCTCTTATAAACATCATTTTTCTTCGGCTTGTCCGTTGGAAAAAAGCTGAACAAAAGGGCCCCCCC
TCCAATGGGGAGTACAGCAGTACCCCCCCGGGGAACTATTATGAAATTGACGGGGGGGATATGACCCCCAAAGGGCGCCCTTATAGCTTTCCCCA
GGGGAATGCCTAATGACCCTGATTTAGTAGCCGCAATGAAAGCCTTAAACAGACCATTCTTTCC
CCTGGGTTTTAAAAAGGAAGGGAGGGAAACTGTTTTTTCTTCCCCTGGTTTTCAAAAAAACAAACCACATTGATCTCCTTTTAAGGGGAAAGGAC
ATGTCCATACTGGAAAATTTCCCGTTAAAATTTAATCAAAAAAACCCCGTCCCATGGCCTGGTACCCCAATCCCCATTTTTTTACCAATGAGGTC
AACAACCCAAAAAATTCAAAAGGGTTTCCCCTCTTATAAACATCATTTTTCTTCGGCTTGTCCGTTGGAAAAAAGCTGAACAAAAGGGCCCCCCC
TCCAATGGGGAGTACAGCAGTACCCCCCCGGGGAACTATTATGAAATTGACGGGGGGGATATGACCCCCAAAGGGCGCCCTTATAGCTTTCCCCA
GGGGAATGCCTAATGACCCTGATTTAGTAGCCGCAATGAAAGCCTTAAACAGACCATTCTTTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E540715] | SGN-U588947 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T341590 [Download][View] | Facility Assigned ID: TUS61C05_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.890 | Expected Error Rate: 0.0282 | Quality Trim Threshold: 14.5 |
Working
