EST details — SGN-E540940
| Search information |
| Request: 540940 | Match: SGN-E540940 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190850 | Clone name: TUS-61-H16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C80568 [cLET-12-K6] | Trace: SGN-T105552 | EST: SGN-E293089 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190850 [TUS-61-H16] | Trace: SGN-T341818 | EST: SGN-E540943 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E540940 | Length: 509 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E540940 [] (trimmed)
CCAAACCCAGGAACTGACTTTTTTTTACCCGGTTTACCCGGAAAAAACATTCCAAAAATCCAAAAAAACAGGGAATTTAAAACCAGGGGGGAAAA
AAATCCCCTCTAAACCCTCAAATGACTTTAAAAAAAGTTTGGGTCCAATCTAAAACCTTACCCCCTTTTATCCCAAAAAATAAACCTTCTTTTTT
ATAAAACTCAAAAAAACTTTCCACCTTAAACAAACCCCTGTTCAAAACTACAACCAAACTGTTGAACCAAATCTTGAAAAAATTGAACCCCGTTC
ATCGATCAGCTTAAAAGCTTTTACGGGGGACAATGGAAGGGCCAAATTCTTCATTTTCCCCCTTCGAAATCCACTTTTTTTGAAAGGGGCTAAAA
AAAACTAAAATAAACCCTCCAATCCAAACCCTGTTTTTCCGTTCAGGGGGCCCCCCTCCCTTGTTTTTCATACTGCGGGGACCAAAAGCGGTAAT
TTCCTTGCTCTTCCGATCAGGAATACCAGGAAAC
AAATCCCCTCTAAACCCTCAAATGACTTTAAAAAAAGTTTGGGTCCAATCTAAAACCTTACCCCCTTTTATCCCAAAAAATAAACCTTCTTTTTT
ATAAAACTCAAAAAAACTTTCCACCTTAAACAAACCCCTGTTCAAAACTACAACCAAACTGTTGAACCAAATCTTGAAAAAATTGAACCCCGTTC
ATCGATCAGCTTAAAAGCTTTTACGGGGGACAATGGAAGGGCCAAATTCTTCATTTTCCCCCTTCGAAATCCACTTTTTTTGAAAGGGGCTAAAA
AAAACTAAAATAAACCCTCCAATCCAAACCCTGTTTTTCCGTTCAGGGGGCCCCCCTCCCTTGTTTTTCATACTGCGGGGACCAAAAGCGGTAAT
TTCCTTGCTCTTCCGATCAGGAATACCAGGAAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E540940] | SGN-U602398 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T341815 [Download][View] | Facility Assigned ID: TUS61H16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.875 | Expected Error Rate: 0.0260 | Quality Trim Threshold: 14.5 |
Working
