EST details — SGN-E541356
| Search information |
| Request: 541356 | Match: SGN-E541356 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191092 | Clone name: TUS-62-B18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C84131 [cLET-27-J19] | Trace: SGN-T109142 | EST: SGN-E295935 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191092 [TUS-62-B18] | Trace: SGN-T342233 | EST: SGN-E541358 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541356 | Length: 566 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541356 [] (trimmed)
AACCAAAACAGTAACCTTTTTATCAAAAAACTTGAATATAGATTTTGATTTGGTCTCCATATAACTTTCCATAACACAAAATCTTTTTTTGAAAA
ACAATGTAACCCAAAATAAACATCCCTAATAACTAAAATTCAACAGTGCAACATAGGAGAAGGCAAAAAAGGAAGTTCTGGATGACTTCAGAGGC
AATCTAAAAAAGGGAGGGTCCCTTTCCTTTTTTGTCCCCCCCTATTTCAAAATGGTTGCCCCTCTTGATTGGGTGCTGTGAAACATGTTTGCAGC
CTTGGCACTGCAGCCTCAAAACAATCTTCTTTGGGGGTTTAACCTTTTTGTGGAAAACAGGCTTGGTCTGACCCCCCTAACCTGATTGTTTCCTG
TCATAACAACCCTTCCCCTGAGCAGCCAAGCTATCTTTCCCCTTCTTGTACTGGGGCACCTTATGCAAGGGGTGCTTTTTGCACTCCTTGGACTT
GCAGTAGGGCTTCTTTGTCTTGGGAACCTTCCCCATTTTCCCAGGCCCAGAGGTTAAACAAAAATAGCAGAAAGCACAATCCCCGTTCAGC
ACAATGTAACCCAAAATAAACATCCCTAATAACTAAAATTCAACAGTGCAACATAGGAGAAGGCAAAAAAGGAAGTTCTGGATGACTTCAGAGGC
AATCTAAAAAAGGGAGGGTCCCTTTCCTTTTTTGTCCCCCCCTATTTCAAAATGGTTGCCCCTCTTGATTGGGTGCTGTGAAACATGTTTGCAGC
CTTGGCACTGCAGCCTCAAAACAATCTTCTTTGGGGGTTTAACCTTTTTGTGGAAAACAGGCTTGGTCTGACCCCCCTAACCTGATTGTTTCCTG
TCATAACAACCCTTCCCCTGAGCAGCCAAGCTATCTTTCCCCTTCTTGTACTGGGGCACCTTATGCAAGGGGTGCTTTTTGCACTCCTTGGACTT
GCAGTAGGGCTTCTTTGTCTTGGGAACCTTCCCCATTTTCCCAGGCCCAGAGGTTAAACAAAAATAGCAGAAAGCACAATCCCCGTTCAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541356] | SGN-U590996 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342231 [Download][View] | Facility Assigned ID: TUS62B18_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.921 | Expected Error Rate: 0.0182 | Quality Trim Threshold: 12.5 |
Working
