EST details — SGN-E541933
| Search information |
| Request: 541933 | Match: SGN-E541933 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191428 | Clone name: TUS-62-P18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91765 [cLEW-8-G23] | Trace: SGN-T112303 | EST: SGN-E300698 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191428 [TUS-62-P18] | Trace: SGN-T342810 | EST: SGN-E541935 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541933 | Length: 660 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541933 [] (trimmed)
AAGGGAAATAAACATGAAACAGTACACAGGGGATATTTTCAAAGATCAAAATATCAGCTTTTACACCAGATTAAAAATAGACAGGGCGGCTACAT
TCAGTATTAAATTCCCCCCCCCGAGCAAATTAAGCAAACTCCCAGGGTAAACCCTAATAGTTAAAGGGATAATCCTCAAAGTTTCCTGATCAATG
CAGGGAAGGAGCCTGGTAATGGTAGCCATTTCCGAAAAAATCGTGGCCTGGAAAAAAATTGTATGCCGGAACCCCTATGAAAAATGGGACATGAG
TGTTGGTCGGCCCAAGGGAAGCATATGGTCCGTCATAAACAGGGTGCGGAAACCTATCAGTCATTCTGGGATAAAAATTCTTCCCAGGGACGACA
TTATTTACTCGGGGGCCATTTCCCACACCATTGGGACAAGGTCTTTTGGATTGAGGTTTTGTAACTTCAGTTGCCTTTTTCTTGTCGGAATTTGC
TTTCTCCAGCTGAAGAACCCTTTTCTGAAGGGGATCCACAAGGGATTGCCCCCCAAGCTTATGGGCTTCAAAGCATTTTAATACAGCCTTTAGGG
GAGAAAACTCTTTCTCAATGACATCATTCTGCACAGTAGGGGAAGCATTTCCAAAATTGGAAGGGGGAAATGCTTTGCTAGCTTCCTTCA
TCAGTATTAAATTCCCCCCCCCGAGCAAATTAAGCAAACTCCCAGGGTAAACCCTAATAGTTAAAGGGATAATCCTCAAAGTTTCCTGATCAATG
CAGGGAAGGAGCCTGGTAATGGTAGCCATTTCCGAAAAAATCGTGGCCTGGAAAAAAATTGTATGCCGGAACCCCTATGAAAAATGGGACATGAG
TGTTGGTCGGCCCAAGGGAAGCATATGGTCCGTCATAAACAGGGTGCGGAAACCTATCAGTCATTCTGGGATAAAAATTCTTCCCAGGGACGACA
TTATTTACTCGGGGGCCATTTCCCACACCATTGGGACAAGGTCTTTTGGATTGAGGTTTTGTAACTTCAGTTGCCTTTTTCTTGTCGGAATTTGC
TTTCTCCAGCTGAAGAACCCTTTTCTGAAGGGGATCCACAAGGGATTGCCCCCCAAGCTTATGGGCTTCAAAGCATTTTAATACAGCCTTTAGGG
GAGAAAACTCTTTCTCAATGACATCATTCTGCACAGTAGGGGAAGCATTTCCAAAATTGGAAGGGGGAAATGCTTTGCTAGCTTCCTTCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541933] | SGN-U572404 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342808 [Download][View] | Facility Assigned ID: TUS62P18_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.904 | Expected Error Rate: 0.0167 | Quality Trim Threshold: 20.5 |
Working
