EST details — SGN-E542837
| Search information |
| Request: 542837 | Match: SGN-E542837 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191951 | Clone name: TUS-64-F13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91040 [cLEW-25-J12] | Trace: SGN-T114590 | EST: SGN-E301831 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191951 [TUS-64-F13] | Trace: SGN-T343713 | EST: SGN-E542838 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542837 | Length: 624 bp (892 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E542837 [] (trimmed)
AACATAAATACACTTCGCACAATCACATTAACAAGGTAAAGAAGAATCATTGCAAATTAAAATTAAATCAGGAATAAATTAAAAGAAGATTATTT
TTCTTCCATACTAGGAACTGCAACAAGAGGAACAGCCTTCCTCAAACTTACTCCAAATTGTTCCTCCATGTTCAATTCCTCCGGAGCCATTCCAT
CAGGTAACTTCCATTTAAATGGTTGAATAACAGAAGCCAACATTAAATTCACCATTCTTATAGCCAGCGGTATTCCAGGACAAATCCTCCTCCCC
GCGCCAAATGGAATAAACTCAAAATCCCTACCTTTATAATCCACGTTAGATTCGATGAATCTTTGAGGCAAAAACTCTAGTGCCCTTTCCCACGA
CTTGGGATCTCTTCCGATTGCCCATGCATTCACGAAAACTTGACTGTATATAGGCACGTTGAAGCCCAACACTTGTATGTCATTTTGTGCTTTGT
GCGGTAATAGTAATGGAACTGCGGGGTGAAGTCTAATCGTTTCTTTTACAACTGCTTGAAGATATGGGAGTTTGGCCAAGTCTGATTCTTTAACT
GCTCTTTCTAGACCTATTTGGTCCATTATTTCTTGTCGAACTTTGTTGAGTTCT
TTCTTCCATACTAGGAACTGCAACAAGAGGAACAGCCTTCCTCAAACTTACTCCAAATTGTTCCTCCATGTTCAATTCCTCCGGAGCCATTCCAT
CAGGTAACTTCCATTTAAATGGTTGAATAACAGAAGCCAACATTAAATTCACCATTCTTATAGCCAGCGGTATTCCAGGACAAATCCTCCTCCCC
GCGCCAAATGGAATAAACTCAAAATCCCTACCTTTATAATCCACGTTAGATTCGATGAATCTTTGAGGCAAAAACTCTAGTGCCCTTTCCCACGA
CTTGGGATCTCTTCCGATTGCCCATGCATTCACGAAAACTTGACTGTATATAGGCACGTTGAAGCCCAACACTTGTATGTCATTTTGTGCTTTGT
GCGGTAATAGTAATGGAACTGCGGGGTGAAGTCTAATCGTTTCTTTTACAACTGCTTGAAGATATGGGAGTTTGGCCAAGTCTGATTCTTTAACT
GCTCTTTCTAGACCTATTTGGTCCATTATTTCTTGTCGAACTTTGTTGAGTTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542837] | SGN-U602550 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343712 [Download][View] | Facility Assigned ID: TUS64F13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0165 | Quality Trim Threshold: 14.5 |
Working
