EST details — SGN-E542918
| Search information |
| Request: 542918 | Match: SGN-E542918 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191998 | Clone name: TUS-64-H12 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91239 [cLEW-26-I16] | Trace: SGN-T114746 | EST: SGN-E302914 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191998 [TUS-64-H12] | Trace: SGN-T343794 | EST: SGN-E542919 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542918 | Length: 699 bp (904 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E542918 [] (trimmed)
AAATTACCAATTTCAAAGTTCAATAAAAATTCACTTGAAAATATACAAAGAAGTACTTATTTAGCACTCAATATTAGTCTAACCATAAACTTTAA
TACAAAGTATGTTTGGGCCAAGTATTTGATGGCAACTTGAGCATTACTACAAAGTATGTTTGTTGGCTCAATAGGCCTAAAAAGCAAGATCCCTT
GAGAGTTTCTTCTTGTTTTTTTATACCCAAATGATAATCCAAAAGTACATAAGAAAAGAGACACAACCAATGACACAAACACTAATAGCAAGTGC
AAGTGAATTTGCTAAAGTAGCATACATACCAGTTACAAATGCAATTACAACAGCACCCATTGCCAAAAGTTGCAAAATACCTGCTATATAATAAT
AACTTCTTAAAACTTTGAACCAGTCCCTTTTACATTCTTCATCTTCGTCTACATCGCAATCTGCCATGAAGAAGTAGATGAATATTGCACCAGCT
GAGAATGCGAATGCCAGGACATCTGAAATAACAAATGCACGAAACGCTGTTTTCCTTAATAGAATAGCCATCCCTTTATTAGGACTGTCATCGTT
GTATAAACCTCCTGGCAATGTGAAACCAGCAGCGAACGTGACTGTCATTAGGAGAGTAGCTACAACTACTTGTATTTGAGCTGCCTTCATAATTT
TTTCTAATTCTAATTTGTCTCTCTTAGCTTTGTC
TACAAAGTATGTTTGGGCCAAGTATTTGATGGCAACTTGAGCATTACTACAAAGTATGTTTGTTGGCTCAATAGGCCTAAAAAGCAAGATCCCTT
GAGAGTTTCTTCTTGTTTTTTTATACCCAAATGATAATCCAAAAGTACATAAGAAAAGAGACACAACCAATGACACAAACACTAATAGCAAGTGC
AAGTGAATTTGCTAAAGTAGCATACATACCAGTTACAAATGCAATTACAACAGCACCCATTGCCAAAAGTTGCAAAATACCTGCTATATAATAAT
AACTTCTTAAAACTTTGAACCAGTCCCTTTTACATTCTTCATCTTCGTCTACATCGCAATCTGCCATGAAGAAGTAGATGAATATTGCACCAGCT
GAGAATGCGAATGCCAGGACATCTGAAATAACAAATGCACGAAACGCTGTTTTCCTTAATAGAATAGCCATCCCTTTATTAGGACTGTCATCGTT
GTATAAACCTCCTGGCAATGTGAAACCAGCAGCGAACGTGACTGTCATTAGGAGAGTAGCTACAACTACTTGTATTTGAGCTGCCTTCATAATTT
TTTCTAATTCTAATTTGTCTCTCTTAGCTTTGTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542918] | SGN-U601924 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343793 [Download][View] | Facility Assigned ID: TUS64H12_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 14.5 |
Working
