EST details — SGN-E543081
| Search information |
| Request: 543081 | Match: SGN-E543081 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192093 | Clone name: TUS-64-L11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94072 [cLEX-2-F23] | Trace: SGN-T115465 | EST: SGN-E303377 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192093 [TUS-64-L11] | Trace: SGN-T343957 | EST: SGN-E543082 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543081 | Length: 591 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543081 [] (trimmed)
TTCTCTATCTAAATATCATATACAATTTGATAATAATTTATTTCATCTAGGATCTCTTGAAACCATTTTGCAATGGTGAATTTGGAGTTAATCTC
TTGTGTATTGTTGTTTCAGAGTGAATGGTTGGCGACGAAGGAGTACTTCTTCTCTTATGATTATGGTGTTGTTGTTTTTGGTGATGATGATGTGG
ACTTGCACTCGTAATTTGTTTGACTTGTTGATCATCTGTTGGAGCTGTGTACACAAATGTTACCATTGAGTTATCTTCATAGTCCTTTAAAGGTT
CTAAAGTTGTCACCACATTACTCATATCTGGTCTAGCTTTTGGCCTGTGGCTTAGGCATTGATAAGCTACTAATGCTGCCTTTTGAACTCCTTCT
TCTGAGTACATACCTTCGAGCCTTGGATCCATTATTCTACGTAGTTTTCGAGGATCTTTTAGTTGTGGTCTTGCCCAATCTACCAAGTTTTGTTC
TCTATGTGGACGACCTTTGTCTACAGATCTTCTACCCGTTAGAAGCTCTAATAGTACTACTCCGAAACTGTATACATCACTAGCTGCAGTCAAAT
GACCGGTCATGATGTATTCAG
TTGTGTATTGTTGTTTCAGAGTGAATGGTTGGCGACGAAGGAGTACTTCTTCTCTTATGATTATGGTGTTGTTGTTTTTGGTGATGATGATGTGG
ACTTGCACTCGTAATTTGTTTGACTTGTTGATCATCTGTTGGAGCTGTGTACACAAATGTTACCATTGAGTTATCTTCATAGTCCTTTAAAGGTT
CTAAAGTTGTCACCACATTACTCATATCTGGTCTAGCTTTTGGCCTGTGGCTTAGGCATTGATAAGCTACTAATGCTGCCTTTTGAACTCCTTCT
TCTGAGTACATACCTTCGAGCCTTGGATCCATTATTCTACGTAGTTTTCGAGGATCTTTTAGTTGTGGTCTTGCCCAATCTACCAAGTTTTGTTC
TCTATGTGGACGACCTTTGTCTACAGATCTTCTACCCGTTAGAAGCTCTAATAGTACTACTCCGAAACTGTATACATCACTAGCTGCAGTCAAAT
GACCGGTCATGATGTATTCAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543081] | SGN-U597236 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343956 [Download][View] | Facility Assigned ID: TUS64L11_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 20.5 |
Working
