EST details — SGN-E543397
| Search information |
| Request: 543397 | Match: SGN-E543397 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192277 | Clone name: TUS-65-D3 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94970 [cLEX-6-J23] | Trace: SGN-T116108 | EST: SGN-E304090 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E543397 | Length: 769 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543397 [] (trimmed)
AGAATAACTCACTACCTTGTATGGAATCCGAATTTATTAAGCTCTTCTTCCTCACTCTACACAATTTTCTTTCCATCTGAAACCAAAGATAGTAA
GTAAACAAACATACATTTCTATGGTATGGACAACTTGCAGCTTTTCATTAATACTGCTTTTGTCCAAAACACTGACACTGGTATTAGCAGCTTGA
AAGCCCGAGTGGTAAACCCGATCTCTAGTTGCTTTTGTGTTAACAAATGCCACTTCTTAGAGCCCTTTACCTCCTATGCTGTGTTTCATCTTCTA
ACCAGAAGCTTTCAAACTCAATAAGTCATCTATATCTTGTGAACACTGTAACCGGCATCCTCCGATGTCATGTTCTCCTTCCAGTTCTCAAATTC
AGATCCACCAAATACTACTTGTTTGATACCGACATAACATATGCGAGCCACGTTATCTTGAATCTCAACATCTCCAATATTATAGAATGTAGTAG
GTGTTACATTTGCCCCCTGAACAGCATCATAATTTGGTCTTTTGTCCAAAGGAGATTGGGACAATTGCATATTCATCGAATTACATCCACCAAGA
CGTCCAACAATGTGCCAAGACCGAATTGTGTCACAAATCAAGGAGATGTCCTTCTCCAATGGGGCATTGTAGAACTCAAACCATATAAAGGTGTT
TGAATAATCAAATTTGTTGAATTCGACTGTCATGGGTGTTGGTGAACCTGTCTTTGTATGAACAATTTTATTCCTTTTCTTTCTCAATCTCTCCT
CCAACCTTG
GTAAACAAACATACATTTCTATGGTATGGACAACTTGCAGCTTTTCATTAATACTGCTTTTGTCCAAAACACTGACACTGGTATTAGCAGCTTGA
AAGCCCGAGTGGTAAACCCGATCTCTAGTTGCTTTTGTGTTAACAAATGCCACTTCTTAGAGCCCTTTACCTCCTATGCTGTGTTTCATCTTCTA
ACCAGAAGCTTTCAAACTCAATAAGTCATCTATATCTTGTGAACACTGTAACCGGCATCCTCCGATGTCATGTTCTCCTTCCAGTTCTCAAATTC
AGATCCACCAAATACTACTTGTTTGATACCGACATAACATATGCGAGCCACGTTATCTTGAATCTCAACATCTCCAATATTATAGAATGTAGTAG
GTGTTACATTTGCCCCCTGAACAGCATCATAATTTGGTCTTTTGTCCAAAGGAGATTGGGACAATTGCATATTCATCGAATTACATCCACCAAGA
CGTCCAACAATGTGCCAAGACCGAATTGTGTCACAAATCAAGGAGATGTCCTTCTCCAATGGGGCATTGTAGAACTCAAACCATATAAAGGTGTT
TGAATAATCAAATTTGTTGAATTCGACTGTCATGGGTGTTGGTGAACCTGTCTTTGTATGAACAATTTTATTCCTTTTCTTTCTCAATCTCTCCT
CCAACCTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543397] | SGN-U583770 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344272 [Download][View] | Facility Assigned ID: TUS65D03_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
