EST details — SGN-E543504
| Search information |
| Request: 543504 | Match: SGN-E543504 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192339 | Clone name: TUS-65-F17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92154 [cLEX-10-E22] | Trace: SGN-T116664 | EST: SGN-E304890 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192339 [TUS-65-F17] | Trace: SGN-T349764 | EST: SGN-E548889 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543504 | Length: 586 bp (909 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543504 [] (trimmed)
CACTTGAAAGAAAATAGTTTTATAATATCAAAGAAAATACAAATCTTTCAATAAAGAAAAAAGAGTACTCCATGGTATAAGAAAATATAATCTTC
ATCAATCATCATTATCATCATCCCCTTCTGATCGATCTGGATCACCGCGGGATATTTGTATGATATATTAGTGAGGGACTATACGAACTATTTTG
TCCAGAAAATTCGTTATCTGTATTAAAGTCGATTGGATCAATTGTATAAAGATCTTTTACTTCATCTTCATTTTCTTCGTCTTCATGTCCATTAG
CCCAAGGGTTATTCTTCGGGAACTTTCTCAAACTTTCAAGTTCCATTGCCACTTCTTTCATCGTAGGCCTATCTTCTCCGCGCAAACTAAGACAA
CCCTTAACAAGCTCAGCAATCTTCTGAAGTTGCTCAAGACTTCCTTCTCTTACAACTCTACGATCAAGAATTTGAAATAAGTTATTCGTGTTCAT
GGACAAAATGAAATAGTCTATCAAACATTTGTCCTTCTCATTTTCCTCCTTCAAAATAGGTTTCAACCCTGTCAAAAGTTCAGCAAGAACTACTC
CAAAACTATAAACGTC
ATCAATCATCATTATCATCATCCCCTTCTGATCGATCTGGATCACCGCGGGATATTTGTATGATATATTAGTGAGGGACTATACGAACTATTTTG
TCCAGAAAATTCGTTATCTGTATTAAAGTCGATTGGATCAATTGTATAAAGATCTTTTACTTCATCTTCATTTTCTTCGTCTTCATGTCCATTAG
CCCAAGGGTTATTCTTCGGGAACTTTCTCAAACTTTCAAGTTCCATTGCCACTTCTTTCATCGTAGGCCTATCTTCTCCGCGCAAACTAAGACAA
CCCTTAACAAGCTCAGCAATCTTCTGAAGTTGCTCAAGACTTCCTTCTCTTACAACTCTACGATCAAGAATTTGAAATAAGTTATTCGTGTTCAT
GGACAAAATGAAATAGTCTATCAAACATTTGTCCTTCTCATTTTCCTCCTTCAAAATAGGTTTCAACCCTGTCAAAAGTTCAGCAAGAACTACTC
CAAAACTATAAACGTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543504] | SGN-U600343 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344379 [Download][View] | Facility Assigned ID: TUS65F17_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.920 | Expected Error Rate: 0.0125 | Quality Trim Threshold: 14.5 |
Working
