EST details — SGN-E543847
| Search information |
| Request: 543847 | Match: SGN-E543847 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192539 | Clone name: TUS-65-O1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C93234 [cLEX-14-B21] | Trace: SGN-T118275 | EST: SGN-E305789 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192539 [TUS-65-O1] | Trace: SGN-T344723 | EST: SGN-E543848 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543847 | Length: 685 bp (874 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543847 [] (trimmed)
GAAAAAAATGGAATATAGGGCAAGATCTTTTCCTAAACCCCCTGGAAAAATTTTTCAAAATCTGGTGAACTTGGCTACATCCCCCCCGGGGGTAA
AAAATGTAACTGGTGGCCCCCTTATTCCCATAACCCAACCCCTCTTTAAGGGGCTATGCCTTGGGTGTTAGACAAACCCAAAGATCCCTAAACCC
CATCGATAAAAAAGGGCCCCAAATTTCAAACCCTTTATTGGAGGGGGGAAAAAAAACCCCCCTTACGTCATGGCTTTCCCCCCAAGACCCCCAAA
AAGCTTTCAGCTTTAAATTACCCCGGCCCCCTTAAAAACCCCCCCAATCCGGGATGCAAAGGTTGGCTTCTGGACCTCCCAAAATATCCCCTCAG
CTGGTTTTGGGCTTTCTACAAGGGCCATACCGACCCCCCTTTTGAAAGTACGCATCTTTTCAGCATTTTTTTTTTTTCCGGCCCCTTGAATCCCT
TTTAAAACCGGGGGAATTTTCCCAAAACCTTCCTAAAAAAGGGCCCCCAGGCCCTTGGGAAATACCCCAGGGATATTGTCCGTGAAACCCCCCCC
GGGAATGGGGGGTTTTCCTTTAACCCCCCCTTTGGTAATAATATCAAAAACCCGGTTAACATATATAACAGTTGGGGGAATCAAAGCTTCCCCCA
GTGTAATAAATTCCCCCGGA
AAAATGTAACTGGTGGCCCCCTTATTCCCATAACCCAACCCCTCTTTAAGGGGCTATGCCTTGGGTGTTAGACAAACCCAAAGATCCCTAAACCC
CATCGATAAAAAAGGGCCCCAAATTTCAAACCCTTTATTGGAGGGGGGAAAAAAAACCCCCCTTACGTCATGGCTTTCCCCCCAAGACCCCCAAA
AAGCTTTCAGCTTTAAATTACCCCGGCCCCCTTAAAAACCCCCCCAATCCGGGATGCAAAGGTTGGCTTCTGGACCTCCCAAAATATCCCCTCAG
CTGGTTTTGGGCTTTCTACAAGGGCCATACCGACCCCCCTTTTGAAAGTACGCATCTTTTCAGCATTTTTTTTTTTTCCGGCCCCTTGAATCCCT
TTTAAAACCGGGGGAATTTTCCCAAAACCTTCCTAAAAAAGGGCCCCCAGGCCCTTGGGAAATACCCCAGGGATATTGTCCGTGAAACCCCCCCC
GGGAATGGGGGGTTTTCCTTTAACCCCCCCTTTGGTAATAATATCAAAAACCCGGTTAACATATATAACAGTTGGGGGAATCAAAGCTTCCCCCA
GTGTAATAAATTCCCCCGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543847] | SGN-U592059 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344722 [Download][View] | Facility Assigned ID: TUS65O01_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.888 | Expected Error Rate: 0.0252 | Quality Trim Threshold: 14.5 |
Working
