EST details — SGN-E544270
| Search information |
| Request: 544270 | Match: SGN-E544270 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192785 | Clone name: TUS-66-I7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C95624 [cLEY-12-J8] | Trace: SGN-T119191 | EST: SGN-E307482 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192785 [TUS-66-I7] | Trace: SGN-T349890 | EST: SGN-E549015 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544270 | Length: 808 bp (850 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544270 [] (trimmed)
AAACCACTAAATATAATTGCTATTGACCATCATGGATAGAAGAGACACTTACAGAATCCAGTAGAAAGCTGTATCAGATTATATTTCAACTGTGT
ATAACACAGCAAACTTTCAAATCTACATATATATTCAAGTATAATATCTGTGTTTTCATCTTCAATTACTCAGATTTGTATTCATCGTCAATTAC
TGAATCAAGGCGCCATTCACTTCCATAATAGGAGTTGGGCAATCCCAACCAGAACTTGAATGCTTCAGCTGCTCGTTTTCGTTCCTTTCTCCTGT
CCTGTCTAGCTCTTGACGCGTGCTTACTAGTAAACATCCTTGAATGCATCTCGACGTAGATCCTAGTAAACTTGGTCTTATTTGGTGGTATCCCG
TGTTGCTCCATGCAAGCAACGATCTCCAACGCTTTCCTAAAGAAAGCTGCTCGGACACATATGTCTGCTAATGTATCCAACAGTCCTTCATCAGG
TTCCAATGGCGGGAGGAGGCCTGAAGACGGAGTAGACTCCTCTCCATTTCCCATTCCACACCTCTGTTTTATCTCATTCCAAAGCAAGAGTGCTT
CTCCCGGCTTCCTAGCCAAAGCTATTCCATTTGCAAGACTGCCATAAGTGGCTACGTTTGGGTAGAATCCGTTTTCTTTCATCCTCTCGATCACA
CTCTTTGCTTCCTCAACCTTTCCTAGCTTAGAGTATGCATCTAACAGCATATTCCAAGCAACCAAATCAACCTTCACTCGAGGGTCTTTAAGCAT
CTCGTCAAACACCCTGTTAACTAGCTTAGCCTGACCAGATGAGGCAAA
ATAACACAGCAAACTTTCAAATCTACATATATATTCAAGTATAATATCTGTGTTTTCATCTTCAATTACTCAGATTTGTATTCATCGTCAATTAC
TGAATCAAGGCGCCATTCACTTCCATAATAGGAGTTGGGCAATCCCAACCAGAACTTGAATGCTTCAGCTGCTCGTTTTCGTTCCTTTCTCCTGT
CCTGTCTAGCTCTTGACGCGTGCTTACTAGTAAACATCCTTGAATGCATCTCGACGTAGATCCTAGTAAACTTGGTCTTATTTGGTGGTATCCCG
TGTTGCTCCATGCAAGCAACGATCTCCAACGCTTTCCTAAAGAAAGCTGCTCGGACACATATGTCTGCTAATGTATCCAACAGTCCTTCATCAGG
TTCCAATGGCGGGAGGAGGCCTGAAGACGGAGTAGACTCCTCTCCATTTCCCATTCCACACCTCTGTTTTATCTCATTCCAAAGCAAGAGTGCTT
CTCCCGGCTTCCTAGCCAAAGCTATTCCATTTGCAAGACTGCCATAAGTGGCTACGTTTGGGTAGAATCCGTTTTCTTTCATCCTCTCGATCACA
CTCTTTGCTTCCTCAACCTTTCCTAGCTTAGAGTATGCATCTAACAGCATATTCCAAGCAACCAAATCAACCTTCACTCGAGGGTCTTTAAGCAT
CTCGTCAAACACCCTGTTAACTAGCTTAGCCTGACCAGATGAGGCAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544270] | SGN-U603821 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345145 [Download][View] | Facility Assigned ID: TUS66I07_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 20.5 |
Working
