EST details — SGN-E544430
| Search information |
| Request: 544430 | Match: SGN-E544430 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192878 | Clone name: TUS-66-M4 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C96167 [cLEY-14-M8] | Trace: SGN-T119719 | EST: SGN-E308036 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192878 [TUS-66-M4] | Trace: SGN-T349916 | EST: SGN-E549041 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544430 | Length: 753 bp (897 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544430 [] (trimmed)
AGCCCTCTGAATTCATTTTTTTTTGAAAATTTTGTACACCTTTTTGGCTTATATGATATCTAAATATATCCCACGCGCCTCAACTGCTTGGAGTC
ACGGGGTGTGCCACATAAGCTAAAAGGTGTACAAAAGTACTAAAAAAATAAATTCAGGGGAATAATAGAACCTTAATTTAGTTAATTCGATCATA
ATCTAAGGGGTACTTGAGTCTTCTCCCTTACAATTTGAGCTATAACTTCTACTTATTCTTATTTTTTTGTCCTTTGGGGGATATTTTTTATGTAC
AAACATGGTATAGCCTTTAATGGAATTGCTTTCTTCAAAGTCATCCCCATTCTTTCATTCATGTCCAAATCTTGTGGTTTCACTCCATTAGCTAA
GACCCAATCAAACTTGTGTAGAATTGACCCTAAAGTAAGTGGTAACATACGAGAAGCAAGGGGAACGGCAGGGCACATTCTTCGACCAGAACCAA
ATGGTATGAACTCAAAATGATGACCTTTATAATCTACCATGTTAGGTTCCAAGAATCTCTCTGGCTTGAATTTCAAAGGATCTTTCCACGTCTTT
GGATCCCTACCAATCGCCCAAACGTTAACAAGAATTTGTGTTTCTTTTGGGATGTGATAACCTAACATGTTACAAGAGTCCATGGCCATGTGTGG
GACTAAGAATGGAAGTGGAGGGTGTAACCTTAGGGTTTCTTTGATCACGCGTTTAAGTAAGAAAGTTTGTCCAAGTCTTCTTCTTCTA
ACGGGGTGTGCCACATAAGCTAAAAGGTGTACAAAAGTACTAAAAAAATAAATTCAGGGGAATAATAGAACCTTAATTTAGTTAATTCGATCATA
ATCTAAGGGGTACTTGAGTCTTCTCCCTTACAATTTGAGCTATAACTTCTACTTATTCTTATTTTTTTGTCCTTTGGGGGATATTTTTTATGTAC
AAACATGGTATAGCCTTTAATGGAATTGCTTTCTTCAAAGTCATCCCCATTCTTTCATTCATGTCCAAATCTTGTGGTTTCACTCCATTAGCTAA
GACCCAATCAAACTTGTGTAGAATTGACCCTAAAGTAAGTGGTAACATACGAGAAGCAAGGGGAACGGCAGGGCACATTCTTCGACCAGAACCAA
ATGGTATGAACTCAAAATGATGACCTTTATAATCTACCATGTTAGGTTCCAAGAATCTCTCTGGCTTGAATTTCAAAGGATCTTTCCACGTCTTT
GGATCCCTACCAATCGCCCAAACGTTAACAAGAATTTGTGTTTCTTTTGGGATGTGATAACCTAACATGTTACAAGAGTCCATGGCCATGTGTGG
GACTAAGAATGGAAGTGGAGGGTGTAACCTTAGGGTTTCTTTGATCACGCGTTTAAGTAAGAAAGTTTGTCCAAGTCTTCTTCTTCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544430] | SGN-U599739 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345305 [Download][View] | Facility Assigned ID: TUS66M04_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |
Working
