EST details — SGN-E544900
| Search information |
| Request: 544900 | Match: SGN-E544900 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193152 | Clone name: TUS-67-H14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C97578 [cLEY-22-E18] | Trace: SGN-T120966 | EST: SGN-E309261 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193152 [TUS-67-H14] | Trace: SGN-T345776 | EST: SGN-E544901 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544900 | Length: 669 bp (897 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544900 [] (trimmed)
AGTACTAACTTTNGCTTCTCAATTCTCAAAAAAGAAAAAGAAAAAGGTTCTCAAATACAAGCAGCATCCCTGAGACACAAGTAAACACCTCTATG
GTGCATTATTCTACTGATAAAAAAGCTTACACACAACTGCAATCTAACAAGAACTACCATTAAAAAAGAGTTAAATACGAGATCGAATTGTTCGT
TCCACACCAACCATTGGTGTAGTGTTGTTGACAAACTCCCCAAATATTATGTCTTCCTCCAATGCTTGTATCGTCTCTGAAGAAAGGCAAATTTC
AACAATCATGCTCCCTTCTTCTAGCCCAGGTGCCACTGTTATCTTCCCATCTAACAGGTTCCCCACCCCACCTCTATGTGCAATCGGCTTTCCCC
AACCAAAATCATACTTATAAACATTGAATTGCGGAGAGCCGTTCAGCATAAAGTAATTGCTTGGCAAATCCCCCAATTTTGGTACCTCAGGTTCC
TTCATCCAATTCTCGTATATGCACTTCAACTTTTCATGATCATGGGTGGCAATCGTCTTATTAATTTGTAAAGCAGCCCATCCAAATCCGTGCTT
GAGCAGCTCTCCCGTCTTGATAGTTGTGGGTGCAGGGTAAATTGCATTCCCAAAGAACCCTTCAGGTAATGGAGGATTCAGTCTTTTCCTCATGT
CAAT
GTGCATTATTCTACTGATAAAAAAGCTTACACACAACTGCAATCTAACAAGAACTACCATTAAAAAAGAGTTAAATACGAGATCGAATTGTTCGT
TCCACACCAACCATTGGTGTAGTGTTGTTGACAAACTCCCCAAATATTATGTCTTCCTCCAATGCTTGTATCGTCTCTGAAGAAAGGCAAATTTC
AACAATCATGCTCCCTTCTTCTAGCCCAGGTGCCACTGTTATCTTCCCATCTAACAGGTTCCCCACCCCACCTCTATGTGCAATCGGCTTTCCCC
AACCAAAATCATACTTATAAACATTGAATTGCGGAGAGCCGTTCAGCATAAAGTAATTGCTTGGCAAATCCCCCAATTTTGGTACCTCAGGTTCC
TTCATCCAATTCTCGTATATGCACTTCAACTTTTCATGATCATGGGTGGCAATCGTCTTATTAATTTGTAAAGCAGCCCATCCAAATCCGTGCTT
GAGCAGCTCTCCCGTCTTGATAGTTGTGGGTGCAGGGTAAATTGCATTCCCAAAGAACCCTTCAGGTAATGGAGGATTCAGTCTTTTCCTCATGT
CAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544900] | SGN-U586560 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345775 [Download][View] | Facility Assigned ID: TUS67H14_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0093 | Quality Trim Threshold: 12.5 |
Working
